RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
TRMT1-201ENST00000221504 RFX7Q2KHR2 1363 aa17.85■□□□□ 0.45
TRMT1-201ENST00000221504 LMBR1LQ6UX01 489 aa17.84■□□□□ 0.45
TRMT1-201ENST00000221504 ZNF589Q86UQ0 364 aaPredicted RBP17.84■□□□□ 0.45
TRMT1-201ENST00000221504 TJP1Q07157 1748 aa17.84■□□□□ 0.45
TRMT1-201ENST00000221504 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
TRMT1-201ENST00000221504 SHANK3Q9BYB0 1731 aa17.84■□□□□ 0.45
TRMT1-201ENST00000221504 FOXO4P98177 505 aa17.84■□□□□ 0.45
TRMT1-201ENST00000221504 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
TRMT1-201ENST00000221504 DDX54Q8TDD1 881 aaKnown RBP17.84■□□□□ 0.45
TRMT1-201ENST00000221504 SYAP1Q96A49 352 aaPredicted RBP17.84■□□□□ 0.45
TRMT1-201ENST00000221504 GADD45BO75293 160 aaPredicted RBP17.83■□□□□ 0.45
TRMT1-201ENST00000221504 F13A1P00488 732 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 IL2RBP14784 551 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 GJB2P29033 226 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 ST3GAL1Q11201 340 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 ME3Q16798 604 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 DBNDD2Q9BQY9 259 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 CARD10Q9BWT7 1032 aa17.83■□□□□ 0.45
TRMT1-201ENST00000221504 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.45
TRMT1-201ENST00000221504 HMG20BQ9P0W2 317 aa17.83■□□□□ 0.44
TRMT1-201ENST00000221504 TNS2Q63HR2 1409 aa17.82■□□□□ 0.44
TRMT1-201ENST00000221504 TAF5LO75529 589 aa17.82■□□□□ 0.44
TRMT1-201ENST00000221504 A1BGP04217 495 aa17.82■□□□□ 0.44
TRMT1-201ENST00000221504 TPCN1Q9ULQ1 816 aa17.82■□□□□ 0.44
TRMT1-201ENST00000221504 ATP6V1DQ9Y5K8 247 aa17.82■□□□□ 0.44
TRMT1-201ENST00000221504 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 HAUS7Q99871 368 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 CNPY2Q9Y2B0 182 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
TRMT1-201ENST00000221504 TSGA10IPQ3SY00 556 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 TAF6LQ9Y6J9 622 aa17.81■□□□□ 0.44
TRMT1-201ENST00000221504 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 DNAJC2Q99543 621 aaKnown RBP17.8■□□□□ 0.44
TRMT1-201ENST00000221504 ALDH8A1Q9H2A2 487 aaPredicted RBP17.8■□□□□ 0.44
TRMT1-201ENST00000221504 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 ZNF609O15014 1411 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 NECAB1Q8N987 351 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
TRMT1-201ENST00000221504 PHF14O94880 888 aa17.79■□□□□ 0.44
TRMT1-201ENST00000221504 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
TRMT1-201ENST00000221504 ZBTB3Q9H5J0 574 aa17.79■□□□□ 0.44
TRMT1-201ENST00000221504 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
TRMT1-201ENST00000221504 PRKCSHP14314 528 aaPredicted RBP17.78■□□□□ 0.44
TRMT1-201ENST00000221504 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
TRMT1-201ENST00000221504 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
TRMT1-201ENST00000221504 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
TRMT1-201ENST00000221504 UBE2HP62256 183 aa17.77■□□□□ 0.44
TRMT1-201ENST00000221504 KRT32Q14532 448 aa17.77■□□□□ 0.44
TRMT1-201ENST00000221504 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
TRMT1-201ENST00000221504 TSPY26PQ9H489 355 aa17.77■□□□□ 0.44
TRMT1-201ENST00000221504 DTNBO60941 627 aa17.77■□□□□ 0.43
TRMT1-201ENST00000221504 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.43
TRMT1-201ENST00000221504 TOB2Q14106 344 aaPredicted RBP17.77■□□□□ 0.43
TRMT1-201ENST00000221504 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.43
TRMT1-201ENST00000221504 KBTBD3Q8NAB2 608 aa17.77■□□□□ 0.43
TRMT1-201ENST00000221504 MCMDC2Q4G0Z9 681 aa17.76■□□□□ 0.43
TRMT1-201ENST00000221504 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
TRMT1-201ENST00000221504 PALLDQ8WX93 1383 aa17.76■□□□□ 0.43
TRMT1-201ENST00000221504 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
TRMT1-201ENST00000221504 FIBPO43427 364 aa17.76■□□□□ 0.43
TRMT1-201ENST00000221504 CHGBP05060 677 aa17.76■□□□□ 0.43
TRMT1-201ENST00000221504 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
TRMT1-201ENST00000221504 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
TRMT1-201ENST00000221504 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
TRMT1-201ENST00000221504 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
TRMT1-201ENST00000221504 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
TRMT1-201ENST00000221504 EVA1CP58658 441 aa17.75■□□□□ 0.43
TRMT1-201ENST00000221504 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
TRMT1-201ENST00000221504 CCDC183Q5T5S1 534 aa17.75■□□□□ 0.43
TRMT1-201ENST00000221504 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
TRMT1-201ENST00000221504 ATG3Q9NT62 314 aa17.75■□□□□ 0.43
TRMT1-201ENST00000221504 EYA2O00167 538 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
TRMT1-201ENST00000221504 HS1BP3Q53T59 392 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
TRMT1-201ENST00000221504 ZSCAN30Q86W11 494 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
TRMT1-201ENST00000221504 CIAO1O76071 339 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 PDCP20941 246 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 RNF214Q8ND24 703 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 ISCA1Q9BUE6 129 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 PAG1Q9NWQ8 432 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 LTBP4Q8N2S1 1624 aa17.74■□□□□ 0.43
TRMT1-201ENST00000221504 TIMM10P62072 90 aa17.73■□□□□ 0.43
TRMT1-201ENST00000221504 LRRC24Q50LG9 513 aa17.73■□□□□ 0.43
TRMT1-201ENST00000221504 TICAM2Q86XR7 235 aa17.73■□□□□ 0.43
TRMT1-201ENST00000221504 NEK1Q96PY6 1258 aa17.73■□□□□ 0.43
TRMT1-201ENST00000221504 GOLIM4O00461 696 aa17.73■□□□□ 0.43
TRMT1-201ENST00000221504 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
TRMT1-201ENST00000221504 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
TRMT1-201ENST00000221504 CYP21A2P08686 494 aa17.72■□□□□ 0.43
TRMT1-201ENST00000221504 TCIRG1Q13488 830 aa17.72■□□□□ 0.43
TRMT1-201ENST00000221504 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms