RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CRNKL1Q9BZJ0 848 aaKnown RBP21.74■■□□□ 1.07
MBD3-201ENST00000156825 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
MBD3-201ENST00000156825 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
MBD3-201ENST00000156825 NLRP3Q96P20 1036 aa21.74■■□□□ 1.07
MBD3-201ENST00000156825 ZSCAN22P10073 491 aaPredicted RBP21.74■■□□□ 1.07
MBD3-201ENST00000156825 MCMDC2Q4G0Z9 681 aa21.74■■□□□ 1.07
MBD3-201ENST00000156825 CTAGE5O15320 804 aa21.73■■□□□ 1.07
MBD3-201ENST00000156825 MARCKSP29966 332 aaPredicted RBP21.73■■□□□ 1.07
MBD3-201ENST00000156825 DZIP3Q86Y13 1208 aaKnown RBP21.73■■□□□ 1.07
MBD3-201ENST00000156825 MACROD2A1Z1Q3 448 aa21.73■■□□□ 1.07
MBD3-201ENST00000156825 AFMP43652 599 aa21.73■■□□□ 1.07
MBD3-201ENST00000156825 ALG1Q9BT22 464 aa21.73■■□□□ 1.07
MBD3-201ENST00000156825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.73■■□□□ 1.07
MBD3-201ENST00000156825 PDCL2Q8N4E4 241 aa21.73■■□□□ 1.07
MBD3-201ENST00000156825 FLT4P35916 1363 aa21.73■■□□□ 1.07
MBD3-201ENST00000156825 IL15P40933 162 aaPredicted RBP21.72■■□□□ 1.07
MBD3-201ENST00000156825 UBE2HP62256 183 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 SAMM50Q9Y512 469 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 C8orf34Q49A92 452 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 KIF18AQ8NI77 898 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 ERICH4A6NGS2 130 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 SEC24BO95487 1268 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 IL2RBP14784 551 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 KIF5CO60282 957 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 USP8P40818 1118 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 ZNF830Q96NB3 372 aaPredicted RBP21.72■■□□□ 1.07
MBD3-201ENST00000156825 EIF3JO75822 258 aaKnown RBP21.72■■□□□ 1.07
MBD3-201ENST00000156825 CCDC102BQ68D86 513 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 CCDC148Q8NFR7 591 aa21.72■■□□□ 1.07
MBD3-201ENST00000156825 ZSCAN12O43309 604 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 TFCP2Q12800 502 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 DUOX2Q9NRD8 1548 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 POLR3AO14802 1390 aaPredicted RBP21.71■■□□□ 1.07
MBD3-201ENST00000156825 TSPY3P0CV98 308 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 TSPY8P0CW00 308 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 RXRAP19793 462 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 DNM1Q05193 864 aaKnown RBP21.71■■□□□ 1.07
MBD3-201ENST00000156825 NAA16Q6N069 864 aaPredicted RBP21.71■■□□□ 1.07
MBD3-201ENST00000156825 PAXIP1Q6ZW49 1069 aaPredicted RBP21.71■■□□□ 1.07
MBD3-201ENST00000156825 CCDC191Q8NCU4 936 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 CABP5Q9NP86 173 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 PAG1Q9NWQ8 432 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 ZSCAN23Q3MJ62 389 aa21.71■■□□□ 1.07
MBD3-201ENST00000156825 HLA-DOAP06340 250 aa21.7■■□□□ 1.06
MBD3-201ENST00000156825 CPA1P15085 419 aa21.7■■□□□ 1.06
MBD3-201ENST00000156825 STX1AQ16623 288 aa21.7■■□□□ 1.06
MBD3-201ENST00000156825 CALML4Q96GE6 196 aa21.7■■□□□ 1.06
MBD3-201ENST00000156825 IFIT1BQ5T764 474 aaKnown RBP21.7■■□□□ 1.06
MBD3-201ENST00000156825 NPATQ14207 1427 aa21.7■■□□□ 1.06
MBD3-201ENST00000156825 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
MBD3-201ENST00000156825 NSFL1CQ9UNZ2 370 aaKnown RBP21.7■■□□□ 1.06
MBD3-201ENST00000156825 DTNBO60941 627 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 HOXC9P31274 260 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 CCDC40Q4G0X9 1142 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 USP48Q86UV5 1035 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 ZBTB40Q9NUA8 1239 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 CCDC66A2RUB6 948 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 ST5P78524 1137 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 DCTPP1Q9H773 170 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 IQCEQ6IPM2 695 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 C19orf44Q9H6X5 657 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 KLHL40Q2TBA0 621 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 ZGPATQ8N5A5 531 aaKnown RBP21.69■■□□□ 1.06
MBD3-201ENST00000156825 OTUD7AQ8TE49 926 aaPredicted RBP21.69■■□□□ 1.06
MBD3-201ENST00000156825 ZSWIM4Q9H7M6 989 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 SYKP43405 635 aa21.69■■□□□ 1.06
MBD3-201ENST00000156825 IRS4O14654 1257 aaPredicted RBP21.68■■□□□ 1.06
MBD3-201ENST00000156825 PER1O15534 1290 aaPredicted RBP21.68■■□□□ 1.06
MBD3-201ENST00000156825 BICC1Q9H694 974 aaKnown RBP21.68■■□□□ 1.06
MBD3-201ENST00000156825 MMRN2Q9H8L6 949 aa21.68■■□□□ 1.06
MBD3-201ENST00000156825 CASQ1P31415 396 aa21.68■■□□□ 1.06
MBD3-201ENST00000156825 RTN1Q16799 776 aa21.68■■□□□ 1.06
MBD3-201ENST00000156825 ESR2Q92731 530 aa21.68■■□□□ 1.06
MBD3-201ENST00000156825 ZFYP08048 801 aaPredicted RBP21.68■■□□□ 1.06
MBD3-201ENST00000156825 HEATR3Q7Z4Q2 680 aa21.68■■□□□ 1.06
MBD3-201ENST00000156825 RBM25P49756 843 aaKnown RBP21.67■■□□□ 1.06
MBD3-201ENST00000156825 TMCO3Q6UWJ1 677 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 UTP14AQ9BVJ6 771 aaKnown RBP21.67■■□□□ 1.06
MBD3-201ENST00000156825 PRC1O43663 620 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 CCDC113Q9H0I3 377 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 DACT1Q9NYF0 836 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 JAKMIP3Q5VZ66 844 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 CCDC12Q8WUD4 166 aaPredicted RBP21.67■■□□□ 1.06
MBD3-201ENST00000156825 CCDC178Q5BJE1 867 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 ZNF518AQ6AHZ1 1483 aa21.67■■□□□ 1.06
MBD3-201ENST00000156825 TIMM10P62072 90 aa21.66■■□□□ 1.06
MBD3-201ENST00000156825 APOBRQ0VD83 1088 aa21.66■■□□□ 1.06
MBD3-201ENST00000156825 PLEKHM2Q8IWE5 1019 aa21.66■■□□□ 1.06
MBD3-201ENST00000156825 CRACR2AQ9BSW2 395 aa21.66■■□□□ 1.06
MBD3-201ENST00000156825 YEATS4O95619 227 aa21.66■■□□□ 1.06
MBD3-201ENST00000156825 PPP4R3AQ6IN85 833 aa21.66■■□□□ 1.06
MBD3-201ENST00000156825 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 NEBLO76041 1014 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 AK2P54819 239 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 CTNNBL1Q8WYA6 563 aaPredicted RBP21.65■■□□□ 1.06
MBD3-201ENST00000156825 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms