RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
CD4-201ENST00000011653 PCCAP05165 728 aaPredicted RBP12.91□□□□□ -0.34
CD4-201ENST00000011653 CASP7P55210 303 aa12.91□□□□□ -0.34
CD4-201ENST00000011653 FOXO4P98177 505 aa12.91□□□□□ -0.34
CD4-201ENST00000011653 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
CD4-201ENST00000011653 CCDC8Q9H0W5 538 aaPredicted RBP12.91□□□□□ -0.34
CD4-201ENST00000011653 GREM2Q9H772 168 aa12.91□□□□□ -0.34
CD4-201ENST00000011653 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
CD4-201ENST00000011653 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
CD4-201ENST00000011653 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
CD4-201ENST00000011653 L1TD1Q5T7N2 865 aaKnown RBP12.9□□□□□ -0.34
CD4-201ENST00000011653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
CD4-201ENST00000011653 PLSCR1O15162 318 aa12.9□□□□□ -0.34
CD4-201ENST00000011653 BAG6P46379 1132 aa12.9□□□□□ -0.34
CD4-201ENST00000011653 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
CD4-201ENST00000011653 SEC31BQ9NQW1 1179 aa12.9□□□□□ -0.34
CD4-201ENST00000011653 LRRC24Q50LG9 513 aa12.89□□□□□ -0.35
CD4-201ENST00000011653 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
CD4-201ENST00000011653 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
CD4-201ENST00000011653 NFIXQ14938 502 aa12.89□□□□□ -0.35
CD4-201ENST00000011653 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
CD4-201ENST00000011653 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
CD4-201ENST00000011653 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
CD4-201ENST00000011653 UTYO14607 1347 aa12.89□□□□□ -0.35
CD4-201ENST00000011653 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
CD4-201ENST00000011653 POLA2Q14181 598 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
CD4-201ENST00000011653 ITGA6P23229 1130 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
CD4-201ENST00000011653 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 AACSQ86V21 672 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
CD4-201ENST00000011653 GYS1P13807 737 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 CTSWP56202 376 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 TFCP2Q12800 502 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 HSCBQ8IWL3 235 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 TTLL11Q8NHH1 800 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 PDE8AO60658 829 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 NTSR2O95665 410 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 LDHAL6AQ6ZMR3 332 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
CD4-201ENST00000011653 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 SNAP23O00161 211 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 SASH1O94885 1247 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 CLASRPQ8N2M8 674 aaKnown RBP12.86□□□□□ -0.35
CD4-201ENST00000011653 NUP98P52948 1817 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
CD4-201ENST00000011653 MCM4P33991 863 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 RILPL2Q969X0 211 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
CD4-201ENST00000011653 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
CD4-201ENST00000011653 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 TIMM10P62072 90 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 MTX1Q13505 466 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
CD4-201ENST00000011653 NDUFB9Q9Y6M9 179 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 SSFA2P28290 1259 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 RFX5P48382 616 aaPredicted RBP12.85□□□□□ -0.35
CD4-201ENST00000011653 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
CD4-201ENST00000011653 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 CNBD1Q8NA66 436 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
CD4-201ENST00000011653 MPHOSPH8Q99549 860 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 UTRNP46939 3433 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 SERPINB2P05120 415 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
CD4-201ENST00000011653 TAF5LO75529 589 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 MX1P20591 662 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 SLC51AQ86UW1 340 aa12.84□□□□□ -0.35
CD4-201ENST00000011653 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 MMP10P09238 476 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 NUP188Q5SRE5 1749 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 PDE1AP54750 535 aa12.83□□□□□ -0.36
CD4-201ENST00000011653 EYA2O00167 538 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
CD4-201ENST00000011653 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 COPRSQ9NQ92 184 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
CD4-201ENST00000011653 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
CD4-201ENST00000011653 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 GOLGA6L3A6NEY3 463 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 ADRA2BP18089 450 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 DDR1Q08345 913 aa12.82□□□□□ -0.36
CD4-201ENST00000011653 TMEM132AQ24JP5 1023 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms