RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Glg1Q61543 1175 aaKnown RBP11.25□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Tmem130Q6NXM3 419 aa11.25□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 NrdcQ8BHG1 1161 aa11.25□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Ly6iQ9WU67 134 aa11.25□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Ddx60E9PZQ1 1711 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Psmd1Q3TXS7 953 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Lrch3Q8BVU0 778 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Rbm17Q8JZX4 405 aaKnown RBP11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Flad1Q8R123 492 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Snap47Q8R570 413 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 WaslQ91YD9 501 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Telo2Q9DC40 840 aaKnown RBP11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Inpp5dQ9ES52 1191 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Col4a1P02463 1669 aa11.24□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Eva1cP58659 440 aa11.23□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Cct4P80315 539 aaKnown RBP11.23□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Btbd11Q6GQW0 1109 aa11.23□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Cog5Q8C0L8 829 aa11.23□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Myt1Q8CFC2 1127 aa11.23□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Prg3Q9JL95 222 aa11.23□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Skint7A7XV04 395 aa11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Btaf1E9QAE3 1848 aa11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Syngap1F6SEU4 1340 aa11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Lama4P97927 1816 aa11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Cnot7Q60809 285 aa11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 TmpoQ61033 693 aaKnown RBP11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Znf354bQ9QXT9 601 aa11.22□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 NinQ61043 2035 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Duox1A2AQ92 1551 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Mybbp1aQ7TPV4 1344 aaKnown RBP11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Npy5rO70342 466 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Atp6v1aP50516 617 aaKnown RBP11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Adam1aQ60813 791 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Prkab2Q6PAM0 271 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Pxylp1Q8BHA9 480 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Stk31Q99MW1 1018 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Trim34aQ99PP6 485 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Myoz2Q9JJW5 264 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 TefQ9JLC6 301 aa11.21□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 SafbD3YXK2 937 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Cald1E9QA15 768 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Cers3Q1A3B0 383 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Q3UK37 420 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Adam39Q7M762 756 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Ptrh1Q8BW00 204 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Slc39a6Q8C145 765 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Nlrp3Q8R4B8 1033 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Rnf181Q9CY62 165 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Crim1Q9JLL0 1037 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 NynrinQ5DTZ0 1840 aa11.2□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Gm42715A0A087WP63 3095 aaKnown RBP11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 1700019A02RikA0A087WPV9 146 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Grm1P97772 1199 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Psd3Q2PFD7 1037 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Calr4Q3TQS0 420 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Ppp1r26Q6A025 1163 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Glis3Q6XP49 780 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Foxo3Q9WVH4 672 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Col1a1P11087 1453 aa11.19□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Abcc12Q80WJ6 1366 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Sh3tc1G3X9F6 1346 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Gm38655A0A286YDK6 273 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Clul1Q3ZRW6 464 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Abhd15Q5F2F2 459 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Klra4Q60651 263 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Slc51aQ8R000 340 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Ascc2Q91WR3 749 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Syt17Q920M7 470 aa11.18□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 March10E9PX79 788 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Gm8882E9Q7E4 283 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 CastP51125 788 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Traf5P70191 558 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 NyxP83503 476 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Q3UJP5 209 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Zscan10Q3URR7 782 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Pcsk7Q61139 770 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Rpgrip1lQ8CG73 1264 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Plekhg6Q8R0J1 787 aa11.17□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Acsl1P41216 699 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Bcl2l13P59017 434 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Rtkn2Q14B46 604 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 GcgrQ61606 485 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Slain1Q68FF7 579 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 GorabQ8BRM2 368 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Skor1Q8BX46 964 aa11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Ncbp3Q8BZR9 615 aaKnown RBP11.16□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Gprasp1Q5U4C1 1347 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Aknad1E9Q8N6 675 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Usp17ldG5E8G2 545 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Usp17lcG5E8I7 545 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 LeprP48356 1162 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Iqsec3Q3TES0 1195 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Susd4Q8BH32 490 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Tmem67Q8BR76 992 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Rtp1Q8C8C1 263 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 MsraQ9D6Y7 233 aa11.15□□□□□ -0.62
Pdlim5-209ENSMUST00000196908 Rtf1A2AQ19 715 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-209ENSMUST00000196908 Vsig10D3YX43 558 aa11.14□□□□□ -0.63
Pdlim5-209ENSMUST00000196908 Gm7347D3YYI9 267 aa11.14□□□□□ -0.63
Pdlim5-209ENSMUST00000196908 Speer4aF8VPX6 267 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms