RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Ak2Q9WTP6 239 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Hecw2Q6I6G8 1578 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Slc4a4O88343 1079 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Gadd45bP22339 160 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ifit2Q64112 472 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Zbtb40Q6PCS8 1258 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Evc2Q8K1G2 1220 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Mctp1E9PV86 951 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Riok1Q922Q2 567 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 ZwintQ9CQU5 252 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Homer1Q9Z2Y3 366 aa12.67□□□□□ -0.38
Msh3-202ENSMUST00000185852 Col1a2Q01149 1372 aa12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 Fam83bQ0VBM2 1012 aa12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 MarsQ68FL6 902 aaKnown RBP12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 Atf7Q8R0S1 413 aa12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 Cep57l1Q8VDS7 400 aa12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 Kcnn1Q9EQR3 537 aa12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 ImmtQ8CAQ8 757 aaKnown RBP12.66□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ftl2P49945 183 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 Lrrc2Q8VDB8 371 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 Lrrc43Q3V0L5 667 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 Ttc12Q8BW49 704 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 Rufy2Q8R4C2 606 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 UvssaQ9D479 717 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 Pmfbp1Q9WVQ0 1022 aa12.65□□□□□ -0.38
Msh3-202ENSMUST00000185852 Prr5lA2AVJ5 370 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 InhbeO08717 350 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Iqsec3Q3TES0 1195 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Bms1Q6PGF5 1284 aaKnown RBP12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Izumo3A6PWV3 263 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Bin1O08539 588 aaKnown RBP12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Nlrp9aQ66X03 949 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Pdzrn3Q69ZS0 1063 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Bag4Q8CI61 457 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Mroh1E0CZ22 1640 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Gm973E9Q295 1059 aa12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Srek1Q8BZX4 494 aaKnown RBP12.64□□□□□ -0.39
Msh3-202ENSMUST00000185852 Atp6v1aP50516 617 aaKnown RBP12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 DbnlQ62418 436 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Fam160b2Q80YR2 744 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Tmem266Q8BZB3 538 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Cdca7lQ922M5 438 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Cep152A2AUM9 1736 aaKnown RBP12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Bin2D3Z6Q9 489 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Gabpb2P81069 414 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Znf653Q6YND2 615 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Olfml1Q8BSH2 233 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Zscan20B2KFW1 1030 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Snrpa1P57784 255 aaKnown RBP12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Rbm27Q5SFM8 1060 aaKnown RBP12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Tti2Q8BGV4 512 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Bloc1s4Q8VED2 215 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Stx6Q9JKK1 255 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Stk36Q69ZM6 1316 aa12.63□□□□□ -0.39
Msh3-202ENSMUST00000185852 Kiaa1210E9Q0C6 1637 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Cyp2d11P24457 504 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Naa30Q8CES0 364 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 MthfsQ9D110 203 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Krt85Q9Z2T6 507 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Iqgap1Q9JKF1 1657 aaKnown RBP12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Gm10093D3YYI8 482 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Hdac1O09106 482 aaKnown RBP12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Prl7a2O54831 253 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Eif6O55135 245 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Gpr182P43142 395 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Igfbp6P47880 238 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 HmcesQ8R1M0 353 aaKnown RBP12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Cdk12Q14AX6 1484 aaKnown RBP12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 TsksO54887 585 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Dph6Q9CQ28 267 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 TnmdQ9EP64 317 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Dip2aQ8BWT5 1523 aa12.62□□□□□ -0.39
Msh3-202ENSMUST00000185852 Uhrf1bp1B2KF50 1429 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Zbtb38Q3LR78 1197 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Mdh1bQ5F204 500 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Kiaa0319Q5SZV5 1081 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Kank4Q6P9J5 1016 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 LlphQ9D945 130 aaKnown RBP12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Ybx3Q9JKB3 361 aaKnown RBP12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Neurl4Q5NCX5 1563 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Mcm4P49717 862 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Trim29Q8R2Q0 587 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 St5Q924W7 1134 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 ScaperF8VQ70 1398 aaKnown RBP12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Dnm1P39053 867 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Atg3Q9CPX6 314 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Zbtb43Q9DAI4 467 aa12.61□□□□□ -0.39
Msh3-202ENSMUST00000185852 Drc7Q6V3W6 876 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Kcnq3Q8K3F6 873 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Ttc37F8VPK0 1563 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Nkx2-3P97334 362 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Ppp6r1Q7TSI3 856 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 U2af1l4Q8BGJ9 220 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Ppp4r3aQ6P2K6 820 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Dydc2Q9D3X8 139 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 Myo5cE9Q1F5 1742 aa12.6□□□□□ -0.39
Msh3-202ENSMUST00000185852 1700029H14RikE9PY36 240 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Stat1P42225 749 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Unc5clQ6R653 518 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Taok2Q6ZQ29 1240 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms