RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Vwa3bJ9JI28 736 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Utp18Q5SSI6 552 aaKnown RBP13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Rdm1Q9CQK3 281 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Cntnap1O54991 1385 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Gpr182P43142 395 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Itga6Q61739 1091 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Golim4Q8BXA1 655 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ak2Q9WTP6 239 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Mapk8ip1Q9WVI9 707 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Abca3Q8R420 1704 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Zkscan8Q8BSL0 588 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Erc1Q99MI1 1120 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 GakQ99KY4 1305 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Plcb2A3KGF7 1181 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ubxn10Q8BG34 277 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Taok3Q8BYC6 898 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ccdc7Q9D541 371 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Add2Q9QYB8 725 aa13.01□□□□□ -0.33
Lig3-210ENSMUST00000173347 Dctn1O08788 1281 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Nek11Q8C0Q4 628 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Cchcr1Q8K2I2 770 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ttc14Q9CSP9 761 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 TsksO54887 585 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Anxa1P10107 346 aaKnown RBP13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Lrrc43Q3V0L5 667 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Susd4Q8BH32 490 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Chmp4cQ9D7F7 232 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Nphp3Q7TNH6 1325 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Atp2b3Q0VF55 1220 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 St18Q80TY4 1045 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Dmrtc1Q9D9R7 182 aa13□□□□□ -0.33
Lig3-210ENSMUST00000173347 Greb1lB9EJV3 1913 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ppfibp2O35711 882 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Znf692Q3U381 531 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Bmp2kQ91Z96 1138 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Zcrb1Q9CZ96 217 aaKnown RBP12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Q9D9S1 216 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Zc3h12cQ5DTV4 884 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ddx19aQ61655 478 aaKnown RBP12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 SowahdQ8BY98 327 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Kiaa0319lQ8K135 1048 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ppil4Q9CXG3 492 aaKnown RBP12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Trip6Q9Z1Y4 480 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 TnksQ6PFX9 1320 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Npc1l1Q6T3U4 1333 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Mybbp1aQ7TPV4 1344 aaKnown RBP12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ankrd31A0A140LI88 1765 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Slc4a1P04919 929 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Afg3l2Q8JZQ2 802 aaKnown RBP12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Plekho1Q9JIY0 408 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Psma5Q9Z2U1 241 aaKnown RBP12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ltbp1Q8CG19 1712 aa12.99□□□□□ -0.33
Lig3-210ENSMUST00000173347 Lama4P97927 1816 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 4933416C03RikQ3V063 378 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Rab3gap1Q80UJ7 981 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Atf7Q8R0S1 413 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Nhsl1Q8CAF4 1587 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ssh1Q76I79 1042 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Sgsm2Q80U12 1005 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Hmg20bQ9Z104 317 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Snrpa1P57784 255 aaKnown RBP12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Tti2Q8BGV4 512 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 StrbpQ91WM1 672 aaKnown RBP12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ppp4r3bQ922R5 820 aa12.98□□□□□ -0.33
Lig3-210ENSMUST00000173347 4930523C07RikE9Q2T4 99 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Plbd2Q3TCN2 594 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Slc38a10Q5I012 1090 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Ltv1Q6NSQ7 470 aaKnown RBP12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Fam160b2Q80YR2 744 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Riok1Q922Q2 567 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Casz1Q9CWL2 1761 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Gm13023A2A8N2 498 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Snai1Q02085 264 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 ZyxQ62523 564 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Gimap8Q75N62 688 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Dmrt2Q8BG36 561 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Fbxo3Q9DC63 480 aa12.97□□□□□ -0.33
Lig3-210ENSMUST00000173347 Cyp2c23E9Q5K4 494 aa12.96□□□□□ -0.33
Lig3-210ENSMUST00000173347 Polr3dQ91WD1 398 aa12.96□□□□□ -0.33
Lig3-210ENSMUST00000173347 Bin2D3Z6Q9 489 aa12.96□□□□□ -0.33
Lig3-210ENSMUST00000173347 NpeppsQ11011 920 aa12.96□□□□□ -0.33
Lig3-210ENSMUST00000173347 Pdlim2Q8R1G6 349 aa12.96□□□□□ -0.33
Lig3-210ENSMUST00000173347 Pde8bE9Q4S1 865 aa12.96□□□□□ -0.34
Lig3-210ENSMUST00000173347 Atp1b3P97370 278 aa12.96□□□□□ -0.34
Lig3-210ENSMUST00000173347 Ift57Q8BXG3 429 aa12.96□□□□□ -0.34
Lig3-210ENSMUST00000173347 Lrit1Q8K099 624 aa12.96□□□□□ -0.34
Lig3-210ENSMUST00000173347 Ugt1a5B2RT14 529 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Mb21d2Q8C525 428 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Pof1bQ8K4L4 587 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Ccdc9Q8VC31 543 aaKnown RBP12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Kcnq5Q9JK45 933 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Col22a1E9Q7P1 1613 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 4931408C20RikE9PWP9 1381 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Pde4bB1AWC9 736 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 1700006A11RikB9EHI3 544 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Dpf1Q9QX66 387 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Cyp3a57D3YYZ0 503 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Rtkn2Q14B46 604 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Rassf8Q8CJ96 419 aa12.95□□□□□ -0.34
Lig3-210ENSMUST00000173347 Bloc1s4Q8VED2 215 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms