RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 AampJ3QN89 436 aa17.21■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Ier5O89113 308 aa17.21■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Il15P48346 162 aa17.21■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Tgfb1i1Q62219 461 aa17.21■□□□□ 0.35
Ercc1-203ENSMUST00000160369 Q8C5K5 320 aa17.21■□□□□ 0.35
Ercc1-203ENSMUST00000160369 AppP12023 770 aa17.2■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Map3k9Q3U1V8 1077 aa17.2■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Slc4a10Q5DTL9 1118 aa17.2■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Tmem143Q8VD26 458 aa17.2■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Slfn1Q9Z0I7 337 aa17.2■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Brpf1B2RRD7 1212 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 NogP97466 232 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Atp8b2P98199 1209 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Cwc27Q3TKY6 469 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Pcsk7Q61139 770 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Best3Q6H1V1 669 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Ptf1aQ9QX98 324 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Lgr5Q9Z1P4 907 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Mbd3Q9Z2D8 285 aaKnown RBP17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Mtcl1Q3UHU5 1945 aa17.19■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Col5a2Q3U962 1497 aa17.18■□□□□ 0.34
Ercc1-203ENSMUST00000160369 NfixP70257 488 aa17.18■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Insm1Q63ZV0 521 aa17.18■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Slc39a11Q8BWY7 342 aa17.18■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Pik3ap1Q9EQ32 811 aa17.18■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Bin2D3Z6Q9 489 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 NeflP08551 543 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Gpr182P43142 395 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Atp6v1aP50516 617 aaKnown RBP17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Tm6sf1P58749 370 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Bend4P86174 541 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 IntuQ059U7 942 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Srgap3Q812A2 1099 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Ppp1r42Q8R1Z4 357 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 HnrnpuQ8VEK3 800 aaKnown RBP17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 CpvlQ9D3S9 478 aa17.17■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Ftl2P49945 183 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Plbd2Q3TCN2 594 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 HlfQ8BW74 295 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Ciao1Q99KN2 339 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Fbxo3Q9DC63 480 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Myoz2Q9JJW5 264 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Gdf11Q9Z1W4 405 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Col3a1P08121 1464 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Znf521Q6KAS7 1311 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Kdm3aQ6PCM1 1323 aa17.16■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Megf6Q80V70 1572 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Eya2O08575 532 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Sult6b1P0CC03 303 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Celf1P28659 486 aaKnown RBP17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Atp8a2P98200 1148 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Jarid2Q62315 1234 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Tspyl2Q7TQI8 677 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Gjd4Q8BSD4 364 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Slc14a2Q8R4T9 930 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Popdc2Q9ES82 367 aa17.15■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Btaf1E9QAE3 1848 aa17.14■□□□□ 0.34
Ercc1-203ENSMUST00000160369 Csf1rP09581 977 aa17.14■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Ppp4r3aQ6P2K6 820 aa17.14■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Tpx2A2APB8 745 aaKnown RBP17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Akap2O54931 893 aa17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Anxa1P10107 346 aaKnown RBP17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Vil1Q62468 827 aa17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 WdpcpQ8C456 722 aa17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Ncoa5Q91W39 579 aaKnown RBP17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Phrf1A6H619 1682 aa17.13■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Chrna5Q2MKA5 467 aa17.12■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Znf496Q5SXI5 585 aa17.12■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Carmil3Q3UFQ8 1375 aa17.12■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Ltn1Q6A009 1767 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Speer4dL7N216 212 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 CfhP06909 1234 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 GabrdP22933 449 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Pa2g4P50580 394 aaKnown RBP17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Zc3h15Q3TIV5 426 aaKnown RBP17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Ell2Q3UKU1 639 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Ddx46Q569Z5 1032 aaKnown RBP17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Gpr101Q80T62 511 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Zkscan8Q8BSL0 588 aa17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Mrpl12Q9DB15 201 aaKnown RBP17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Kiaa0232Q80U59 1396 aaKnown RBP17.11■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Pde8bE9Q4S1 865 aa17.1■□□□□ 0.33
Ercc1-203ENSMUST00000160369 PnnO35691 725 aaKnown RBP17.1■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Znf692Q3U381 531 aa17.1■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Fam13aQ8BGI4 693 aa17.1■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Rrs1Q9CYH6 365 aaKnown RBP17.1■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Nlrp1aQ2LKU9 1182 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Atg9aQ68FE2 551 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Tmc2Q8R4P4 888 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 LratQ9JI60 231 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Stk32bQ9JJX8 414 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Nphp1Q9QY53 687 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Sh3bp5Q9Z131 463 aa17.09■□□□□ 0.33
Ercc1-203ENSMUST00000160369 Duxf3A0A0N4SV92 674 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Eddm13E9Q7F5 164 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 NpcdF8VQB8 469 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Gsdma2Q32M21 443 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Adgre1Q61549 931 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Kiaa0753Q6A000 959 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Rab3gap1Q80UJ7 981 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms