RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Ankle2Q6P1H6 964 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Kcnf1Q7TSH7 493 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Srgap3Q812A2 1099 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 MypopQ8R4U1 393 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Pdzd9Q9D9M4 266 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Elf2Q9JHC9 593 aa10.27□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ktn1Q61595 1327 aaKnown RBP10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Prex1Q69ZK0 1650 aa10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 A0A1L1SQF0 893 aa10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 GpkowQ56A08 488 aa10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Wdr3Q8BHB4 942 aaKnown RBP10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Tmx4Q8C0L0 335 aa10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 MicalclQ9D5U9 680 aa10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Brpf3B2KF05 1204 aaKnown RBP10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Hmgb2P30681 210 aaKnown RBP10.27□□□□□ -0.77
Col28a1-201ENSMUST00000115537 FosbP13346 338 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Sparcl1P70663 650 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 L1td1Q587J6 782 aaKnown RBP10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Zc3h12cQ5DTV4 884 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ndufa8Q9DCJ5 172 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 NefhP19246 1090 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Zap70P43404 618 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Trak2Q6P9N8 913 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Pdzrn3Q69ZS0 1063 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 RbsnQ80Y56 783 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ddx27Q921N6 760 aaKnown RBP10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Rims2Q9EQZ7 1530 aa10.26□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ccdc129Q14B48 1034 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Cyp7a1Q64505 503 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Taf7Q9R1C0 341 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Larp1Q6ZQ58 1072 aaKnown RBP10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ano10Q8BH79 659 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ulbp1Q8HWA3 334 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Paf1Q8K2T8 535 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Vamp4O70480 141 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ttll12Q3UDE2 639 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Zkscan4Q5SZT6 480 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Gimap8Q75N62 688 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Wdr24Q8CFJ9 790 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Smc1bQ920F6 1248 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 MycbpQ9EQS3 103 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ttc21aQ8C0S4 1314 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Pard3Q99NH2 1333 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Nfatc2ipO09130 412 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Rtel1Q0VGM9 1203 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Esyt1Q3U7R1 1092 aaKnown RBP10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ppp6r1Q7TSI3 856 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Fam76aQ922G2 307 aa10.25□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Sema6bO54951 886 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Rrs1Q9CYH6 365 aaKnown RBP10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Eif3aP23116 1344 aaKnown RBP10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Bag1Q60739 355 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ddx58Q6Q899 926 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 E4f1Q8CCE9 783 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Cnpy2Q9QXT0 182 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Utp18Q5SSI6 552 aaKnown RBP10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Trim28Q62318 834 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Adck5Q80V03 582 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Phf20l1Q8CCJ9 1013 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Frat2Q8K025 231 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Plagl1Q9JLQ4 704 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Nsd3Q6P2L6 1439 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Med14A2ABV5 1459 aaKnown RBP10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Rims1Q99NE5 1463 aa10.24□□□□□ -0.77
Col28a1-201ENSMUST00000115537 A0A0U1RNP2 1173 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Lrrc43Q3V0L5 667 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Pim2Q62070 370 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Cep57l1Q8VDS7 400 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Hdac6Q9Z2V5 1149 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Lcmt1A0A0U1RNF2 332 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Kmt5bQ3U8K7 883 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 RestQ8VIG1 1082 aa10.23□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Akap12Q9WTQ5 1684 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Nap1l1P28656 391 aaKnown RBP10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Hspa4Q61316 841 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Jarid2Q62315 1234 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ddx11Q6AXC6 880 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Mum1Q6DID5 682 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Rad17Q6NXW6 688 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ttc27Q8CD92 847 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Top1mtQ8R4U6 593 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Gps2Q921N8 327 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Echdc1Q9D9V3 322 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Myo1cQ9WTI7 1063 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Uhrf1bp1lA2RSJ4 1457 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Dhx8A2A4P0 1244 aaKnown RBP10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Capn2O08529 700 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Abl1P00520 1123 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 ItpripQ3TNL8 555 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 TfrcQ62351 763 aaKnown RBP10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Exoc8Q6PGF7 716 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Nol7Q9D7Z3 254 aaKnown RBP10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Znf568E9PYI1 671 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Stx1aO35526 288 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Actn3O88990 900 aaKnown RBP10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Rnf20Q5DTM8 973 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Lrrc8aQ80WG5 810 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Syt1P46096 421 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ano8Q6PB70 1060 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Dusp9Q7TNL7 452 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms