RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Cep55Q8BT07 462 aa12.98□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Golim4Q8BXA1 655 aa12.98□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Cwc25Q9DBF7 416 aa12.98□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Zscan20B2KFW1 1030 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Bin1O08539 588 aaKnown RBP12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Kifc2O08672 792 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Igflr1Q3U4N7 345 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Limch1Q3UH68 1057 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Ddx46Q569Z5 1032 aaKnown RBP12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Qser1A2BIE1 1698 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Atf7Q8R0S1 413 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Dydc2Q9D3X8 139 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Hand2Q61039 217 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Tango6Q8C3S2 1079 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Otud6bQ8K2H2 294 aa12.97□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Zrsr2Q62377 462 aaKnown RBP12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Nat10Q8K224 1024 aaKnown RBP12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Mcmdc2E9Q956 681 aa12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Brinp3Q499E0 766 aa12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Serpina10Q8R121 448 aa12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Arhgef28P97433 1693 aa12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Myom1Q62234 1667 aaKnown RBP12.96□□□□□ -0.33
Col20a1-201ENSMUST00000108856 Mrps27Q8BK72 415 aaKnown RBP12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Chd1lQ9CXF7 900 aa12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Stxbp4Q9WV89 557 aa12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Atg4a-psA0A0G2JFS9 396 aa12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Il4rP16382 810 aa12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Pa2g4P50580 394 aaKnown RBP12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Atg4aQ8C9S8 396 aa12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Iqca1Q9CUL5 857 aa12.96□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Slc7a3P70423 618 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 ItpripQ3TNL8 555 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Spg7Q3ULF4 781 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ano8Q6PB70 1060 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Snx13Q6PHS6 957 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Slc35g1Q8BY79 368 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 ParvgQ9ERD8 331 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Odf2A3KGV1 830 aaKnown RBP12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Jarid2Q62315 1234 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Dnaaf4Q8R368 420 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 GckrQ91X44 587 aa12.95□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Armc3A2AU72 881 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Mmp8O70138 465 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Larp1Q6ZQ58 1072 aaKnown RBP12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ankrd23Q812A3 306 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 NsmfQ99NF2 532 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 CenpqQ9CPQ5 267 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Rai14Q9EP71 979 aaKnown RBP12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Rbm8a2A0A0N4SUH6 174 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Myo1bP46735 1107 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Slc13a4Q8BZ82 625 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 GlmnQ8BZM1 596 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ppp6r3Q922D4 844 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Rbm8aQ9CWZ3 174 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Igbp1bQ9QZ29 343 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Dip2aQ8BWT5 1523 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 HmmrQ00547 794 aaKnown RBP12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Tmod2Q9JKK7 351 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Tns3Q5SSZ5 1440 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ppp1r21Q3TDD9 780 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cep112Q5PR68 954 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Sycp1Q62209 993 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Lrrcc1Q69ZB0 1026 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Podxl2Q8CAE9 603 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ccdc39Q9D5Y1 937 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Taf7Q9R1C0 341 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 DmtnQ9WV69 405 aa12.94□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Abcd1P48410 736 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Bms1Q6PGF5 1284 aaKnown RBP12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Sde2Q8K1J5 448 aaKnown RBP12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 RestQ8VIG1 1082 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Foxp4Q9DBY0 795 aaKnown RBP12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Plekho1Q9JIY0 408 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ces1hD3Z298 562 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 NapbP28663 298 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Hdgfl1Q2VPR5 283 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Secisbp2lQ6A098 1086 aaKnown RBP12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Lmbr1lQ9D1E5 489 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ier5O89113 308 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 LyarQ08288 388 aaKnown RBP12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Scaf1Q5U4C3 1256 aaKnown RBP12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Esco1Q69Z69 843 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Riok1Q922Q2 567 aa12.93□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Stk36Q69ZM6 1316 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Dhx8A2A4P0 1244 aaKnown RBP12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cfap73J3QPZ5 306 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Stat1P42225 749 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Gnat3Q3V3I2 354 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Atp2b4Q6Q477 1205 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cdk12Q14AX6 1484 aaKnown RBP12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cdhr2E9Q7P9 1308 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Trpm1Q2TV84 1622 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Znf653Q6YND2 615 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Larp6Q8BN59 492 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Bloc1s2Q9CWG9 143 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ttll12Q3UDE2 639 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ccdc158Q8CDI6 1109 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Tmc2Q8R4P4 888 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Luzp1Q8R4U7 1068 aaKnown RBP12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cyp26c1B2RXA7 518 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms