RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Prune1Q8BIW1 454 aa23.36■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Brf1Q8CFK2 676 aa23.36■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Timm10P62073 90 aa23.35■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Unc5clQ6R653 518 aa23.35■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Zkscan8Q8BSL0 588 aa23.35■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Jdp2P97875 163 aa23.35■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Nucb1Q02819 459 aaKnown RBP23.35■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Stk3Q9JI10 497 aa23.35■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Bin2D3Z6Q9 489 aa23.34■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Apba2P98084 750 aa23.34■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 EappQ5BU09 281 aa23.34■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Plcd4Q8K3R3 807 aa23.33■■□□□ 1.33
Sqstm1-202ENSMUST00000102774 Ccdc6D3YZP9 469 aa23.33■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 VeztQ3ZK22 780 aa23.33■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Rab3gap1Q80UJ7 981 aa23.32■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Kif2cQ922S8 721 aa23.32■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Plekho1Q9JIY0 408 aa23.32■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Gja10Q9WUS4 505 aa23.32■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Eva1cP58659 440 aa23.32■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 CpzQ8R4V4 654 aa23.32■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Hsp90b1P08113 802 aaKnown RBP23.31■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Pde3bQ61409 1100 aa23.31■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Msl1Q6PDM1 616 aa23.31■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Sf3b3Q921M3 1217 aaKnown RBP23.31■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Nphp3Q7TNH6 1325 aa23.31■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 EspnlQ3UYR4 1005 aa23.3■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Il1rapl2Q9ERS6 686 aa23.3■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Mctp2Q5RJH2 878 aa23.3■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Slurp2P0DP59 97 aa23.29■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Plbd2Q3TCN2 594 aa23.29■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Asap2Q7SIG6 958 aa23.29■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 GorabQ8BRM2 368 aa23.29■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Rgs17Q9QZB0 210 aa23.29■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Rhot2Q8JZN7 620 aa23.28■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Atp2b3Q0VF55 1220 aa23.28■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Tmem266Q8BZB3 538 aa23.28■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Sh3bp5Q9Z131 463 aa23.27■■□□□ 1.32
Sqstm1-202ENSMUST00000102774 Pde8bE9Q4S1 865 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Vps54Q5SPW0 977 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Fbxo3Q9DC63 480 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Znfx1Q8R151 1909 aaKnown RBP23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 1700029H14RikE9PY36 240 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Ube4aE9Q735 1028 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Plekhf1Q3TB82 279 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 1810065E05RikQ5NC41 235 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Ppip5k2Q6ZQB6 1129 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Scn11aQ9R053 1765 aa23.26■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Slc4a1P04919 929 aa23.25■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Nol8Q3UHX0 1147 aaKnown RBP23.25■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Slc39a11Q8BWY7 342 aa23.25■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Rbbp8nlA2ABX0 614 aa23.25■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 TsksO54887 585 aa23.25■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Rabep1O35551 862 aa23.24■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Ppm1gQ61074 542 aa23.24■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Krt25Q8VCW2 446 aa23.24■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Tmem143Q8VD26 458 aa23.24■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Popdc2Q9ES82 367 aa23.24■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Gm7347D3YYI9 267 aa23.23■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Kif23E9Q5G3 953 aa23.23■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Speer4aF8VPX6 267 aa23.23■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Sh3tc1G3X9F6 1346 aa23.23■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Ipo9Q91YE6 1041 aa23.23■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Ccne2Q9Z238 404 aa23.23■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Togaram1Q6A070 1776 aaKnown RBP23.22■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Col3a1P08121 1464 aa23.22■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Kcnq5Q9JK45 933 aa23.22■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Sned1Q70E20 1403 aa23.22■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Aknad1E9Q8N6 675 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Sde2Q8K1J5 448 aaKnown RBP23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Chrna2Q91X60 512 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Rbm5Q91YE7 815 aaKnown RBP23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Fam84aQ9D650 292 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Lgr5Q9Z1P4 907 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Prdm11A2AGX3 565 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Znf496Q5SXI5 585 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Ift57Q8BXG3 429 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 St5Q924W7 1134 aa23.21■■□□□ 1.31
Sqstm1-202ENSMUST00000102774 Speer4dL7N216 212 aa23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Sept1P42209 366 aa23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Tfip11Q9ERA6 838 aaKnown RBP23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Znf609Q8BZ47 1413 aa23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Ddx46Q569Z5 1032 aaKnown RBP23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 ZyxQ62523 564 aa23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 CpvlQ9D3S9 478 aa23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Adarb2Q9JI20 745 aa23.2■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Myo3bQ1EG27 1305 aa23.19■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Nup98Q6PFD9 1816 aaKnown RBP23.19■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 ChgaP26339 463 aaKnown RBP23.19■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Znf692Q3U381 531 aa23.19■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Atxn2lQ7TQH0 1049 aaKnown RBP23.19■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 GabrdP22933 449 aa23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Wdhd1P59328 1117 aa23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Rps8P62242 208 aaKnown RBP23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Sptlc3Q8BG54 563 aa23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Golim4Q8BXA1 655 aa23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Strip1Q8C079 837 aa23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 McamQ8R2Y2 648 aaKnown RBP23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Ppil4Q9CXG3 492 aaKnown RBP23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 Naa16Q9DBB4 864 aa23.18■■□□□ 1.3
Sqstm1-202ENSMUST00000102774 TnksQ6PFX9 1320 aa23.18■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms