RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Atg4aQ8C9S8 396 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Usp21Q9QZL6 566 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Lgr5Q9Z1P4 907 aa27.73■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Frmpd3A0A140LIW3 1774 aa27.72■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Nkx1-2P42580 305 aa27.72■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Dhx38Q80X98 1228 aa27.72■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Kiaa0232Q80U59 1396 aaKnown RBP27.71■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Zkscan2G3X952 960 aa27.71■■■□□ 2.03
Scn1b-201ENSMUST00000098548 IarsQ8BU30 1262 aa27.71■■■□□ 2.03
Scn1b-201ENSMUST00000098548 LratQ9JI60 231 aa27.71■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Hirip3Q8BLH7 601 aa27.7■■■□□ 2.03
Scn1b-201ENSMUST00000098548 Mfap1aC0HKD8 439 aaKnown RBP27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Mfap1bC0HKD9 439 aaKnown RBP27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Cfap70D3YVL2 1141 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Q8C5K5 320 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Chmp3Q9CQ10 224 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Anxa1P10107 346 aaKnown RBP27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Lmnb1P14733 588 aaKnown RBP27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Atp6v0a2P15920 856 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 EgfrQ01279 1210 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Fhdc1Q3ULZ2 1149 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Tango6Q8C3S2 1079 aa27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Noc3lQ8VI84 807 aaKnown RBP27.69■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Magea6O89010 325 aa27.68■■■□□ 2.02
Scn1b-201ENSMUST00000098548 AppP12023 770 aa27.68■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Ets1P27577 440 aa27.68■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Magea3Q6T340 320 aa27.68■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Tmem87bQ8BKU8 555 aa27.68■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Prl3d3A0A0M6L0J6 224 aa27.67■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Dok7Q18PE0 504 aa27.67■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Pde3bQ61409 1100 aa27.67■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Sde2Q8K1J5 448 aaKnown RBP27.67■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Ncoa5Q91W39 579 aaKnown RBP27.67■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Mtcl1Q3UHU5 1945 aa27.67■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Snrpa1P57784 255 aaKnown RBP27.66■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Slc38a10Q5I012 1090 aa27.66■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Slc39a11Q8BWY7 342 aa27.66■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Smarca5Q91ZW3 1051 aaKnown RBP27.66■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Taf1dQ9D4V4 322 aa27.66■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Itgb4A2A863 1818 aa27.66■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Sult6b1P0CC03 303 aa27.65■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Gpr182P43142 395 aa27.65■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Nek4Q9Z1J2 792 aa27.65■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Ppp1r9bQ6R891 817 aaKnown RBP27.65■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Adarb2Q9JI20 745 aa27.65■■■□□ 2.02
Scn1b-201ENSMUST00000098548 Bin2D3Z6Q9 489 aa27.64■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Tgfb2P27090 414 aa27.64■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Psd3Q2PFD7 1037 aa27.64■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Tbc1d9Q3UYK3 1264 aa27.64■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Rbm17Q8JZX4 405 aaKnown RBP27.64■■■□□ 2.01
Scn1b-201ENSMUST00000098548 CpvlQ9D3S9 478 aa27.64■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Atg9aQ68FE2 551 aa27.63■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Zbtb3Q91X45 518 aa27.63■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Oas2E9Q9A9 742 aa27.62■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Ciapin1Q8WTY4 309 aa27.62■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Ftl2P49945 183 aa27.61■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Rps8P62242 208 aaKnown RBP27.61■■■□□ 2.01
Scn1b-201ENSMUST00000098548 HlfQ8BW74 295 aa27.61■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Edc3Q8K2D3 508 aaKnown RBP27.61■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Eif2s2Q99L45 331 aaKnown RBP27.61■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Rrs1Q9CYH6 365 aaKnown RBP27.61■■■□□ 2.01
Scn1b-201ENSMUST00000098548 1700029H14RikE9PY36 240 aa27.6■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Eya2O08575 532 aa27.6■■■□□ 2.01
Scn1b-201ENSMUST00000098548 ChgaP26339 463 aaKnown RBP27.6■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Dis3l2Q8CI75 870 aaKnown RBP27.6■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Znf609Q8BZ47 1413 aa27.6■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Ube4aE9Q735 1028 aa27.59■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Sptbn5F6UCX4 1208 aa27.59■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Ptpdc1Q6NZK8 747 aa27.59■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Naa16Q9DBB4 864 aa27.59■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Sh3bp5Q9Z131 463 aa27.59■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Map3k15A2AQW0 1331 aa27.58■■■□□ 2.01
Scn1b-201ENSMUST00000098548 McamQ8R2Y2 648 aaKnown RBP27.58■■■□□ 2.01
Scn1b-201ENSMUST00000098548 Abcc4E9Q236 1325 aa27.58■■■□□ 2
Scn1b-201ENSMUST00000098548 Znf496Q5SXI5 585 aa27.57■■■□□ 2
Scn1b-201ENSMUST00000098548 Pcsk7Q61139 770 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Rab3gap1Q80UJ7 981 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Pdzph1Q8BGR1 1238 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Camkk2Q8C078 588 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Cypt1Q8CH20 168 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Nup188Q6ZQH8 1759 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Myo3bQ1EG27 1305 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 NfixP70257 488 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Mre11Q61216 706 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Zkscan8Q8BSL0 588 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Mrps5Q99N87 432 aaKnown RBP27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Dydc2Q9D3X8 139 aa27.56■■■□□ 2
Scn1b-201ENSMUST00000098548 Celf1P28659 486 aaKnown RBP27.55■■■□□ 2
Scn1b-201ENSMUST00000098548 Rbm27Q5SFM8 1060 aaKnown RBP27.55■■■□□ 2
Scn1b-201ENSMUST00000098548 Tmc2Q8R4P4 888 aa27.55■■■□□ 2
Scn1b-201ENSMUST00000098548 Plekho1Q9JIY0 408 aa27.55■■■□□ 2
Scn1b-201ENSMUST00000098548 Zfp831A2ADM8 1628 aa27.55■■■□□ 2
Scn1b-201ENSMUST00000098548 Klrk1O54709 232 aa27.54■■■□□ 2
Scn1b-201ENSMUST00000098548 Ciao1Q99KN2 339 aa27.54■■■□□ 2
Scn1b-201ENSMUST00000098548 Gm10093D3YYI8 482 aa27.53■■■□□ 2
Scn1b-201ENSMUST00000098548 Hdac1O09106 482 aaKnown RBP27.53■■■□□ 2
Scn1b-201ENSMUST00000098548 Nucb1Q02819 459 aaKnown RBP27.53■■■□□ 2
Scn1b-201ENSMUST00000098548 4930504O13RikQ8C5Z9 145 aa27.53■■■□□ 2
Scn1b-201ENSMUST00000098548 Bcar3Q9QZK2 820 aa27.53■■■□□ 2
Scn1b-201ENSMUST00000098548 Pdia3P27773 505 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms