RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Ubxn4Q8VCH8 506 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Noc3lQ8VI84 807 aaKnown RBP12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Cbx8Q9QXV1 362 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Fut8Q9WTS2 575 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 DnmbpQ6TXD4 1580 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Cdk5rap2Q8K389 1822 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 1700113H08RikE9Q9Q5 327 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Tnnt1O88346 262 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Irf6P97431 467 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Dhx40Q6PE54 779 aaKnown RBP12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Srgap3Q812A2 1099 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 E2f4Q8R0K9 410 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 AvenQ9D9K3 342 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Stk11Q9WTK7 436 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Rad50P70388 1312 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 CoblQ5NBX1 1337 aaKnown RBP12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Nphp3Q7TNH6 1325 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 A0A1L1SQF0 893 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Sgsm2Q80U12 1005 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Zfp446Q8C9M8 523 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Bicdl2Q8CHW5 507 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 MicalclQ9D5U9 680 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Abca6Q8K441 1624 aa12.55□□□□□ -0.4
Rnf41-201ENSMUST00000096386 AU022751B1B0V2 589 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Fam107bQ3TGF2 131 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Zbtb40Q6PCS8 1258 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Cfap100Q80VN0 613 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Calcoco1Q8CGU1 691 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Evc2Q8K1G2 1220 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Plcd1Q8R3B1 756 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Brwd3A2AHJ4 1799 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Lig3P97386 1015 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 GclcP97494 637 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Fchsd2Q3USJ8 740 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Hspa4Q61316 841 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Klra3Q64329 266 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Prkag3Q8BGM7 489 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Usp16Q99LG0 825 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Mlh1Q9JK91 760 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Nfu1Q9QZ23 255 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Abca17E9PX95 1733 aa12.54□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Rsrc2A2RTL5 376 aaKnown RBP12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Cnbd1B1AWM0 430 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Klra9Q2TJJ8 266 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Ccdc33Q3ULW6 985 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Klra10Q9R1G6 266 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Ppp1r1bQ60829 194 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Trim25Q61510 634 aaKnown RBP12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Usp32F8VPZ3 1604 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Evi5P97366 809 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Aifm3Q3TY86 605 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Ccdc186Q8C9S4 917 aa12.53□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Msh6P54276 1358 aaKnown RBP12.52□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Ppfia4B8QI36 1187 aa12.52□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Jakmip3Q5DTN8 844 aa12.52□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Baiap3Q80TT2 1134 aa12.52□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Erlin2Q8BFZ9 340 aa12.52□□□□□ -0.4
Rnf41-201ENSMUST00000096386 Knl1Q66JQ7 1612 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ercc6l2Q9JIM3 1537 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 1700006A11RikB9EHI3 544 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ddx49Q4FZF3 480 aaKnown RBP12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Tti2Q8BGV4 512 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Hook1Q8BIL5 728 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Q8BZJ8 459 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Abcb6Q9DC29 842 aa12.52□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Hnrnph1O35737 449 aaKnown RBP12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Mdh1P14152 334 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Znf653Q6YND2 615 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ccdc40Q8BI79 1192 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Aox1O54754 1333 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Prex1Q69ZK0 1650 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Map2k1P31938 393 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Hnrnph2P70333 449 aaKnown RBP12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Cdc37Q61081 379 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Phf23Q8BSN5 401 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Dhx8A2A4P0 1244 aaKnown RBP12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Lnx1O70263 728 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 F2rP30558 430 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ecm2Q5FW85 670 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 TxlnaQ6PAM1 554 aaKnown RBP12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ccdc47Q9D024 483 aaKnown RBP12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Xpo4Q9ESJ0 1151 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 PalmQ9Z0P4 383 aa12.51□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Tbc1d2B1AVH7 922 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 EmbP21995 330 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Trerf1Q8BXJ2 1205 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Wdr60Q8C761 999 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Mkrn1Q9QXP6 481 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Nphp1Q9QY53 687 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Plxnc1Q9QZC2 1574 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Eef2kO08796 724 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Puf60Q3UEB3 564 aaKnown RBP12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ppp6r1Q7TSI3 856 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Q8C1R3 189 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Pcdhb15Q91Y04 786 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Trim66Q924W6 1242 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Stk26Q99JT2 416 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Add2Q9QYB8 725 aa12.5□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Kif13aQ9EQW7 1749 aa12.49□□□□□ -0.41
Rnf41-201ENSMUST00000096386 Ric8aQ3TIR3 530 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms