RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Ube3aO08759 870 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Sptlc2P97363 560 aaKnown RBP11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Cnga2Q62398 664 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Arhgef6Q8K4I3 771 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Plcd1Q8R3B1 756 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Slc52a2Q9D8F3 450 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Specc1lQ2KN98 1118 aaKnown RBP11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Krt23Q99PS0 422 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ubn2Q80WC1 1314 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ehmt1Q5DW34 1296 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ddx41Q91VN6 622 aaKnown RBP11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 NapgQ9CWZ7 312 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 AatfQ9JKX4 526 aaKnown RBP11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Rrp1P56183 494 aaKnown RBP11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ankrd26Q811D2 1581 aa11.69□□□□□ -0.54
Lig4-201ENSMUST00000095476 Zfp853A0A1D5RM95 733 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Sem1P60897 70 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ttc41Q692V3 1318 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 F2rP30558 430 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Rad23bP54728 416 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Cnnm1Q0GA42 951 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Efcab8Q8C9R9 203 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Nop2Q922K7 793 aaKnown RBP11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Uso1Q9Z1Z0 959 aaKnown RBP11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Lrrc8aQ80WG5 810 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 U2af1l4Q8BGJ9 220 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gapvd1Q6PAR5 1458 aa11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 VimP20152 466 aaKnown RBP11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 Etf1Q8BWY3 437 aaKnown RBP11.68□□□□□ -0.54
Lig4-201ENSMUST00000095476 EmbP21995 330 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gnl3lQ6PGG6 577 aaKnown RBP11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Luc7l2Q7TNC4 392 aaKnown RBP11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 TatQ8QZR1 454 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Erbb4Q61527 1308 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 CalcaP70160 136 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Atp8b2P98199 1209 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 ChmQ9QXG2 665 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Tnnc1P19123 161 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ppfia3P60469 1194 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Capza3P70190 299 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Spata24Q6P926 205 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Kiaa1524Q8BWY9 907 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Q8BZJ8 459 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 Mknk2Q8CDB0 459 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 StambpQ9CQ26 424 aa11.67□□□□□ -0.54
Lig4-201ENSMUST00000095476 B4galnt4Q766D5 1034 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Tex13c2A0A0G2JGA3 530 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 TrdnE9Q9K5 693 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Vamp4O70480 141 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Evi5P97366 809 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Tsg101Q61187 391 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Lrsam1Q80ZI6 727 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gbp9Q8BTS3 619 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Dmrtc1Q9D9R7 182 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Sept14Q9DA97 430 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 AmfrQ9R049 643 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Arhgef12Q8R4H2 1543 aaKnown RBP11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Mcmdc2E9Q956 681 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Bach1P97302 739 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Gm21985Q6P6P5 1106 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Cfap100Q80VN0 613 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Psmb7P70195 277 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Specc1Q5SXY1 1067 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 SyncQ9EPM5 470 aa11.66□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ubash3aQ3V3E1 624 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Zmynd15Q8C0R7 736 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Krt222Q8CCX5 294 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Xpo4Q9ESJ0 1151 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Myo1cQ9WTI7 1063 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Cpsf1Q9EPU4 1441 aaKnown RBP11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Prl7d1P04769 244 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Myo1bP46735 1107 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Cc2d1bQ8BRN9 848 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ubxn1Q922Y1 297 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Krt8P11679 490 aaKnown RBP11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Agbl1Q09M05 972 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Ifit2Q64112 472 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Matr3Q8K310 846 aaKnown RBP11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Bcl11bQ99PV8 884 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 Aox1O54754 1333 aa11.65□□□□□ -0.54
Lig4-201ENSMUST00000095476 NpcdF8VQB8 469 aa11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 Stmn4P63042 189 aa11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 Ccdc157Q5SPX1 718 aa11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 Gngt1Q61012 74 aa11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 RragbQ6NTA4 374 aa11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 Calml4Q91WQ9 153 aa11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 Nol7Q9D7Z3 254 aaKnown RBP11.65□□□□□ -0.55
Lig4-201ENSMUST00000095476 Tex35Q14BK3 207 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Ccdc172Q810N9 267 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Micall1Q8BGT6 870 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Naa30Q8CES0 364 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Ifi35Q9D8C4 286 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Ccdc38Q8CDN8 563 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 4933428M09RikQ9D3X3 192 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Ankrd50F7BE84 1390 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Unc13aQ4KUS2 1712 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Ess2O70279 479 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Samsn1P57725 372 aa11.64□□□□□ -0.55
Lig4-201ENSMUST00000095476 Leo1Q5XJE5 667 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms