RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Hsf2bpQ9D4G2 338 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Tmx4Q8C0L0 335 aa12.02□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Tbc1d8bA3KGB4 1114 aa12.02□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Slc4a4O88343 1079 aa12.02□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Ccdc181Q80ZU5 509 aa12.02□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Amotl1Q9D4H4 968 aa12.02□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Prpf40aQ9R1C7 953 aaKnown RBP12.02□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Aox4Q3TYQ9 1336 aa12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ankrd35E9Q9D8 996 aa12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Cnga2Q62398 664 aa12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Med4Q9CQA5 270 aa12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Dydc1Q9D9T0 175 aa12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 A0A1W2P7S8 802 aa12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Cdc5lQ6A068 802 aaKnown RBP12.02□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Metap2O08663 478 aaKnown RBP12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Rnaseh1O70338 285 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Esco1Q69Z69 843 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Znf653Q6YND2 615 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Kif18aQ91WD7 886 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 ZwintQ9CQU5 252 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Dnajc10Q9DC23 793 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Dhx9O70133 1380 aaKnown RBP12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tdo2P48776 406 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Pls1Q3V0K9 630 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tmem132eQ6IEE6 982 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tut1Q8R3F9 869 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Eif4g1Q6NZJ6 1600 aaKnown RBP12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ccdc170D3YXL0 722 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Gnat2P50149 354 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 LyarQ08288 388 aaKnown RBP12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Cfap100Q80VN0 613 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ranbp6Q8BIV3 1105 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ttc12Q8BW49 704 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Mcur1Q9CXD6 340 aa12.01□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Calm1P0DP26 149 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Calm2P0DP27 149 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Calm3P0DP28 149 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Sept11Q8C1B7 431 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tldc2A2ACG1 198 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Skor2A7M7C7 1008 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Snrpa1P57784 255 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tekt3Q6X6Z7 490 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ccdc122Q8BVN0 290 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Gtf3c5Q8R2T8 520 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Irs4Q9Z0Y7 1216 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 GabpaQ00422 454 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Gjb2Q00977 226 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Bbof1Q3V079 533 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Large2Q5XPT3 690 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Nap1l4Q78ZA7 375 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Dnaaf4Q8R368 420 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 NinlQ6ZQ12 1394 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 PxdnQ3UQ28 1475 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ankrd26Q811D2 1581 aa12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Cbx1P83917 185 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ssrp1Q08943 708 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Nlrp2Q4PLS0 1046 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Smc1aQ9CU62 1233 aaKnown RBP12□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ccdc6D3YZP9 469 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Q3UPC7 1272 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Slc38a10Q5I012 1090 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Wwc1Q5SXA9 1104 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Amotl2Q8K371 772 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Clip2Q9Z0H8 1047 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Gm15262A0A140LIQ5 728 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Hace1Q3U0D9 909 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Otud6bQ8K2H2 294 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Bbs5Q9CZQ9 341 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Pprc1Q6NZN1 1644 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Astn2Q80Z10 1352 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 XpcP51612 930 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Stxbp3Q60770 592 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 ThrspQ62264 150 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ppp4r3aQ6P2K6 820 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Abcc5Q9R1X5 1436 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Prkg1P0C605 671 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Spata18Q0P557 537 aa11.99□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Plch2A2AP18 1501 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Trim30cD3YVI9 513 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Zbtb21E9Q444 1094 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Map2k1P31938 393 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tax1bp1Q3UKC1 814 aaKnown RBP11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Gas2l2Q5SSG4 860 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Naa15Q80UM3 865 aaKnown RBP11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Slc12a5Q91V14 1138 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tnpo1Q8BFY9 898 aaKnown RBP11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Tmc2Q8R4P4 888 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Il1rapl2Q9ERS6 686 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Hmg20bQ9Z104 317 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Gna11P21278 359 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Maco1Q7TQE6 664 aaKnown RBP11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Abtb2Q7TQI7 1024 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 ThemisQ8BGW0 636 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ccdc113Q8C5T8 377 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Mx1P09922 631 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Casp1P29452 402 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Hand2Q61039 217 aa11.98□□□□□ -0.49
Rtn3-204ENSMUST00000088171 E9QMW4 1145 aa11.97□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Arl1P61211 181 aa11.97□□□□□ -0.49
Rtn3-204ENSMUST00000088171 Ccdc102aQ3TMW1 549 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms