RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ssrp1Q08943 708 aaKnown RBP11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Cfap100Q80VN0 613 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ccdc114Q3UX62 658 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Als2cr12Q8BVM7 383 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Lmtk2Q3TYD6 1471 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Plch2A2AP18 1501 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Fam76aQ922G2 307 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Dennd3A2RT67 1274 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Hip1rQ9JKY5 1068 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Tnni2P13412 182 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ano2Q8CFW1 1002 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Fermt2Q8CIB5 680 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Gli2Q0VGT2 1544 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Krt7Q9DCV7 457 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Map3k4O08648 1597 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ccdc148Q6P5U8 527 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Gramd4Q8CB44 633 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Igf2bp2Q5SF07 592 aaKnown RBP11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Arfgap2Q99K28 520 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Clip2Q9Z0H8 1047 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Map3k2Q61083 619 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ccdc94Q9D6J3 314 aa11.91□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Epb41l2O70318 988 aaKnown RBP11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Tbc1d5Q80XQ2 815 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Abca8bQ8K440 1620 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 CactinQ9CS00 772 aaKnown RBP11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Sept6Q9R1T4 434 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Mcm3P25206 812 aaKnown RBP11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Taok3Q8BYC6 898 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Nap1l4Q78ZA7 375 aaKnown RBP11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ift74Q8BKE9 600 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Lrrc43Q3V0L5 667 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Gtpbp4Q99ME9 634 aaKnown RBP11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Dapk3O54784 448 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ccdc12Q8R344 166 aaKnown RBP11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Atxn3Q9CVD2 355 aa11.9□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Rbm26Q6NZN0 1012 aaKnown RBP11.9□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Spats2Q8K1N4 545 aaKnown RBP11.9□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Slc1a4O35874 532 aa11.9□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ppp1r21Q3TDD9 780 aa11.9□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Nfxl1E9Q8I7 918 aaKnown RBP11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Taf7Q9R1C0 341 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Fam186bD3Z420 943 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Nkx1-2P42580 305 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cbx1P83917 185 aaKnown RBP11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ppp2r5bQ6PD28 497 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Yeats4Q9CR11 227 aaKnown RBP11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tacc2Q9JJG0 1149 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tnip1Q9WUU8 647 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Gm10378F6XQQ1 160 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Gng11P61953 73 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Kdm4cQ8VCD7 1054 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cep19Q9CQA8 163 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 WtapQ9ER69 396 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Egfem1Q8C088 590 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 BrapQ99MP8 591 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Abcc2Q8VI47 1543 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Map3k7clP58500 142 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Aimp1P31230 310 aaKnown RBP11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Klc3Q91W40 508 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Hdac9Q99N13 588 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tacc3Q9JJ11 631 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Bcar3Q9QZK2 820 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Arhgef11Q68FM7 1552 aa11.89□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Znf653Q6YND2 615 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Six6os1Q9CTN5 574 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Rai14Q9EP71 979 aaKnown RBP11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Krt15Q61414 452 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 IbspQ61711 324 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ccdc91Q9D8L5 442 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Epb41l3Q9WV92 929 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Mug2P28666 1451 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Grm8P47743 908 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 HellsQ60848 821 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Spa17Q62252 149 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ythdc2B2RR83 1445 aaKnown RBP11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Mcmdc2E9Q956 681 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 HomezQ80W88 542 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Exoc1Q8R3S6 894 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Stac3Q8BZ71 360 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Stk36Q69ZM6 1316 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Cbfa2t2O70374 594 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tnnc1P19123 161 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Micall1Q8BGT6 870 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Frmd3Q8BHD4 595 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Lcmt1A0A0U1RNF2 332 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Maip1Q8BHE8 291 aa11.88□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Atp2a2O55143 1044 aaKnown RBP11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Hdhd2Q3UGR5 259 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Hirip3Q8BLH7 601 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Irx4Q9QY61 515 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ssh2Q5SW75 1423 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Frmpd2A0A140LI67 1392 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Apol10bG3X9K7 334 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Ttc14Q9CSP9 761 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Sh2d4bA6X942 431 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Myd88P22366 296 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 P4ha1Q60715 534 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Tpcn1Q9EQJ0 817 aa11.87□□□□□ -0.51
Scn8a-201ENSMUST00000082209 Brd1E9PZ26 1189 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms