RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Hook2Q7TMK6 716 aa16.84■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Lrsam1Q80ZI6 727 aa16.84■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Klhl30Q8C3F7 581 aa16.84■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Tmod2Q9JKK7 351 aa16.84■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Ccdc121E9Q6D3 323 aa16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Dennd3A2RT67 1274 aa16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Hmgb1P63158 215 aaKnown RBP16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Fam83gQ5SWY7 812 aa16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Vps16Q920Q4 839 aa16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Lmbr1lQ9D1E5 489 aa16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Slx4ipQ9D7Y9 413 aa16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Prpf40aQ9R1C7 953 aaKnown RBP16.83■□□□□ 0.29
Pcdh20-201ENSMUST00000061628 Ncoa3O09000 1398 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Nf2P46662 596 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Usp5P56399 858 aaKnown RBP16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gbp1Q01514 589 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fermt2Q8CIB5 680 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Nip7Q9CXK8 180 aaKnown RBP16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fam213aQ9CYH2 218 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Aplp1Q03157 653 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ythdc2B2RR83 1445 aaKnown RBP16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fam135bQ9DAI6 1403 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Acbd3Q8BMP6 525 aa16.83■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Hdhd2Q3UGR5 259 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Efcab2Q9CQ46 164 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Zbtb21E9Q444 1094 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 P4ha1Q60715 534 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Rad17Q6NXW6 688 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 BrapQ99MP8 591 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Tmco5aQ9D9D5 303 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Sptlc2P97363 560 aaKnown RBP16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Dydc2Q9D3X8 139 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 MthfsQ9D110 203 aa16.82■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 HellsQ60848 821 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Podxl2Q8CAE9 603 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Acsbg1Q99PU5 721 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Slc4a4O88343 1079 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Snx13Q6PHS6 957 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Thoc2B1AZI6 1594 aaKnown RBP16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ccdc170D3YXL0 722 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fermt1P59113 677 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ppfibp1Q8C8U0 969 aaKnown RBP16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 SltmQ8CH25 1031 aaKnown RBP16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fam76aQ922G2 307 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ncf1Q09014 390 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ranbp6Q8BIV3 1105 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Syt10Q9R0N4 523 aa16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Cpsf1Q9EPU4 1441 aaKnown RBP16.81■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gm7347D3YYI9 267 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Rasal2E9PW37 1286 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Speer4aF8VPX6 267 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Krt7Q9DCV7 457 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fam186bD3Z420 943 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Stmn4P63042 189 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ano1Q8BHY3 960 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Matr3Q8K310 846 aaKnown RBP16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Exoc1Q8R3S6 894 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Fmnl3Q6ZPF4 1028 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 St5Q924W7 1134 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Hip1rQ9JKY5 1068 aa16.8■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ccdc162pQ0VG85 912 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Luc7l2Q7TNC4 392 aaKnown RBP16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Pola1P33609 1465 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gm28919A0A087WP35 240 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Vamp4O70480 141 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Tyro3P55144 880 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Tacc2Q9JJG0 1149 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Serpinc1P32261 465 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Lrrc43Q3V0L5 667 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ttc12Q8BW49 704 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gramd4Q8CB44 633 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 DymQ8CHY3 669 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Yeats4Q9CR11 227 aaKnown RBP16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Rufy3Q9D394 469 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 AmfrQ9R049 643 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Sbno1Q689Z5 1390 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 TrdnE9Q9K5 693 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Eif4a2P10630 407 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 ArsiQ32KI9 573 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Esyt1Q3U7R1 1092 aaKnown RBP16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 BbxQ8VBW5 907 aa16.79■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ube3aO08759 870 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Prim1P20664 417 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 RalylQ8BTF8 293 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Xrcc4Q924T3 326 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gimap5Q8BWF2 308 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 BicraF8VPZ9 1578 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Syt1P46096 421 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Ift122Q6NWV3 1182 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gtf3c5Q8R2T8 520 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Klhdc4Q921I2 584 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Gm10378F6XQQ1 160 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Scaf1Q5U4C3 1256 aaKnown RBP16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Tmem143Q8VD26 458 aa16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Uso1Q9Z1Z0 959 aaKnown RBP16.78■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Rnf216P58283 853 aa16.77■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Tmem94Q7TSH8 1360 aa16.77■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Catsper2A2ARP9 588 aa16.77■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 4921504E06RikQ8CET2 560 aa16.77■□□□□ 0.28
Pcdh20-201ENSMUST00000061628 Mrpl12Q9DB15 201 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 117.4 ms