RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Cfap69Q8BH53 942 aa8.13□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Taf5lQ91WQ5 589 aa8.13□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Antxr1Q9CZ52 562 aa8.13□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cdk12Q14AX6 1484 aaKnown RBP8.13□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cops6O88545 324 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ppm1fQ8CGA0 452 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Lrrc2Q8VDB8 371 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 NsmfQ99NF2 532 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Atp7bQ64446 1462 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Gemin5Q8BX17 1502 aaKnown RBP8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Nrxn1Q9CS84 1514 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Kdm6aO70546 1401 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Nkx2-3P97334 362 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Limch1Q3UH68 1057 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ubash3aQ3V3E1 624 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ano8Q6PB70 1060 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Drc7Q6V3W6 876 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ano1Q8BHY3 960 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Srek1Q8BZX4 494 aaKnown RBP8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Atg3Q9CPX6 314 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Bloc1s2Q9CWG9 143 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 TnksQ6PFX9 1320 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Zmym3Q9JLM4 1370 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Pdia4P08003 638 aaKnown RBP8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Igfbp6P47880 238 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Adcy5P84309 1262 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Med4Q9CQA5 270 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Eya2O08575 532 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ddb1Q3U1J4 1140 aaKnown RBP8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Gm12185Q5NCB2 835 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Tmem143Q8VD26 458 aa8.12□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Igsf1Q7TQA1 1317 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Tmem2Q5FWI3 1383 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cdk5rap2Q8K389 1822 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Pank2Q3U4S0 443 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 U2af1l4Q8BGJ9 220 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Nek11Q8C0Q4 628 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Nup133Q8R0G9 1155 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cnot6lQ8VEG6 555 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Qtrt2B8ZXI1 415 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Myl3P09542 204 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Gabpb2P81069 414 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 NpeppsQ11011 920 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 TrhQ62361 256 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Gm21985Q6P6P5 1106 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Serpina10Q8R121 448 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ubxn4Q8VCH8 506 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Rrp9Q91WM3 475 aaKnown RBP8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ehbp1l1Q99MS7 1716 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Tom1O88746 492 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ube2hP62257 183 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Esyt1Q3U7R1 1092 aaKnown RBP8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ehmt1Q5DW34 1296 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Znf653Q6YND2 615 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Mrpl50Q8VDT9 159 aaKnown RBP8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Slc5a4bQ91ZP4 660 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Tbc1d8Q9Z1A9 1134 aa8.11□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Smarcc1P97496 1104 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 IntuQ059U7 942 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Fnbp4Q6ZQ03 1031 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Podxl2Q8CAE9 603 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 ImmtQ8CAQ8 757 aaKnown RBP8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Krt84Q99M73 603 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ccdc173A0JLY1 547 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Zc3h12cQ5DTV4 884 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 CtcfQ61164 736 aaKnown RBP8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Isy1Q69ZQ2 285 aaKnown RBP8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Kiaa0753Q6A000 959 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 EngaseQ8BX80 734 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Fez1Q8K0X8 392 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Lonrf3Q9D4H7 753 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 CemipQ8BI06 1361 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 TnrQ8BYI9 1358 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cfap73J3QPZ5 306 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Iqsec3Q3TES0 1195 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Zbtb40Q6PCS8 1258 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Evc2Q8K1G2 1220 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Kcnq3Q8K3F6 873 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ccdc39Q9D5Y1 937 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Pik3ap1Q9EQ32 811 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Popdc2Q9ES82 367 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Mmel1Q9JLI3 765 aa8.1□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Dip2bQ3UH60 1574 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Nphp3Q7TNH6 1325 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cfap58B2RW38 873 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Vwa3bJ9JI28 736 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Prl7d1P04769 244 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Dnm1P39053 867 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Pde4dQ01063 747 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 HellsQ60848 821 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Me3Q8BMF3 604 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Cadps2Q8BYR5 1297 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 IncenpQ9WU62 880 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Ppp1r21Q3TDD9 780 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Atp1a3Q6PIC6 1013 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Abtb2Q7TQI7 1024 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Rps6kb1Q8BSK8 525 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Tmem266Q8BZB3 538 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Zbtb1Q91VL9 713 aa8.09□□□□□ -1.11
Col6a6-201ENSMUST00000060896 Rai14Q9EP71 979 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms