RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Zfp213E9QAW0 468 aa17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Tex2Q6ZPJ0 1128 aaKnown RBP17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Dhx9O70133 1380 aaKnown RBP17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 Cep128Q8BI22 1102 aa17.77■□□□□ 0.44
Ubr3-201ENSMUST00000055758 U2af1l4Q8BGJ9 220 aa17.77■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ift74Q8BKE9 600 aa17.77■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Sbno1Q689Z5 1390 aa17.77■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Taf7lQ9D3R9 471 aa17.77■□□□□ 0.43
Ubr3-201ENSMUST00000055758 PrphP15331 475 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Stmn1P54227 149 aaKnown RBP17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Map4k4P97820 1233 aaKnown RBP17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Triml1Q8BVP1 470 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ubxn1Q922Y1 297 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ttc21aQ8C0S4 1314 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 ErmnQ5EBJ4 281 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Tceanc2Q8R2M0 207 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Slc38a10Q5I012 1090 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Scaf1Q5U4C3 1256 aaKnown RBP17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Smarcc2Q6PDG5 1213 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Pik3r4Q8VD65 1358 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Eef2P58252 858 aaKnown RBP17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Rnf41Q8BH75 317 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Lonp2Q9DBN5 852 aa17.76■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Phldb1Q6PDH0 1371 aaKnown RBP17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Atp2a2O55143 1044 aaKnown RBP17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ppp1r9aH3BJD6 1292 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Kif5aP33175 1027 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Fermt1P59113 677 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Gzf1Q4VBD9 706 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Krt77Q6IFZ6 572 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Grpel1Q99LP6 217 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Nphp3Q7TNH6 1325 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ube3aO08759 870 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 PrxO55103 1391 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Spocd1B1ASB6 936 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 B4galnt4Q766D5 1034 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Speer3W4VSP1 261 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Gimap6Q8K349 305 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Fam114a2Q8VE88 497 aa17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 SarnpQ9D1J3 210 aaKnown RBP17.75■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Iws1Q8C1D8 766 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Vps36Q91XD6 386 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Sclt1G5E861 688 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Zfp251Q6PCX8 632 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 DymQ8CHY3 669 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Znf287Q9EQB9 759 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ncapd3Q6ZQK0 1506 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Soga1E1U8D0 1418 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Kcnn1Q9EQR3 537 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Nedd9O35177 833 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 ApobrQ8VBT6 942 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Fam170aQ66LM6 333 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 TnikP83510 1323 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Stx8O88983 236 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Mum1Q6DID5 682 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Sdad1Q80UZ2 687 aaKnown RBP17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 HnrnpmQ9D0E1 729 aaKnown RBP17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Map3k5O35099 1380 aa17.74■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Asic3Q6X1Y6 530 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Vps52Q8C754 723 aaKnown RBP17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 IqcdQ9D3V1 458 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Atp1a4Q9WV27 1032 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 ZfaP23607 742 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ak9G3UYQ4 1894 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 IbtkQ6ZPR6 1352 aaKnown RBP17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Capn2O08529 700 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Cfap100Q80VN0 613 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Kiaa1524Q8BWY9 907 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Tnip1Q9WUU8 647 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Catsper2A2ARP9 588 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Igsf3Q6ZQA6 1194 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Rabgap1A2AWA9 1064 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Liat1Q810M6 228 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Mis12Q9CY25 206 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Tnnc1P19123 161 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Sem1P60897 70 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Lrsam1Q80ZI6 727 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Sos1Q62245 1319 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Serpinc1P32261 465 aa17.73■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Gm45140A0A0N4SUM8 220 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 F2rP30558 430 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ttll12Q3UDE2 639 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Cep85Q8BMK0 761 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Eif2aQ8BJW6 581 aaKnown RBP17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ccdc97Q9DBT3 340 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Pet2A2AHY8 747 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Chmp6P0C0A3 200 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Frat1P70339 274 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Sf3a3Q9D554 501 aaKnown RBP17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Q3UPC7 1272 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ppp1r14cQ8R4S0 164 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Mtmr7Q9Z2C9 660 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ift122Q6NWV3 1182 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 RbsnQ80Y56 783 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Tmem266Q8BZB3 538 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Mrps25Q9D125 171 aaKnown RBP17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Fam204aQ8C6C7 236 aa17.72■□□□□ 0.43
Ubr3-201ENSMUST00000055758 CftrP26361 1476 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Haus2Q9CQS9 234 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Zkscan4Q5SZT6 480 aa17.71■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms