RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Stat1P42225 749 aa16.52■□□□□ 0.24
Lime1-201ENSMUST00000048077 Zpr1Q62384 459 aa16.52■□□□□ 0.24
Lime1-201ENSMUST00000048077 AbraQ8BUZ1 375 aa16.52■□□□□ 0.24
Lime1-201ENSMUST00000048077 Usp44Q8C2S0 711 aa16.52■□□□□ 0.24
Lime1-201ENSMUST00000048077 Tmc2Q8R4P4 888 aa16.52■□□□□ 0.24
Lime1-201ENSMUST00000048077 Stard3nlQ9DCI3 235 aa16.52■□□□□ 0.24
Lime1-201ENSMUST00000048077 Spata31d1bE9QA57 1361 aa16.52■□□□□ 0.23
Lime1-201ENSMUST00000048077 Prl3d2F6R3P9 224 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 MlecQ6ZQI3 291 aaKnown RBP16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ttc27Q8CD92 847 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Smc4Q8CG47 1286 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Pnma3Q8JZW8 466 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Rapgef3Q8VCC8 918 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Speer4bQ9D9F7 267 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Cwc25Q9DBF7 416 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Pde3aQ9Z0X4 1141 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 AK157302I3ITR1 129 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Pcmtd1P59913 357 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Gse1Q3U3C9 1213 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ddx17Q501J6 650 aaKnown RBP16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 EappQ5BU09 281 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Kank4Q6P9J5 1016 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 Isca1Q9D924 129 aa16.51■□□□□ 0.23
Lime1-201ENSMUST00000048077 TrdnE9Q9K5 693 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 Cfap73J3QPZ5 306 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 HdgfP51859 237 aaKnown RBP16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 Pank2Q3U4S0 443 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 R3hcc1Q8BSI6 488 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 Cadps2Q8BYR5 1297 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 Naa30Q8CES0 364 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 ZgpatQ8VDM1 511 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 Npc1l1Q6T3U4 1333 aa16.5■□□□□ 0.23
Lime1-201ENSMUST00000048077 Pcdh10E9PXQ7 1057 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 AppP12023 770 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Bach2P97303 839 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Hvcn1Q3U2S8 269 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Atg9aQ68FE2 551 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Mb21d2Q8C525 428 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Tsr2Q8C8T8 191 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Rdm1Q9CQK3 281 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 ZwintQ9CQU5 252 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Irgm2A0A140LIF8 407 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 ZyxQ62523 564 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Dhx38Q80X98 1228 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Me3Q8BMF3 604 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Slx1bQ8BX32 270 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Tmem266Q8BZB3 538 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Plcd1Q8R3B1 756 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Srgap1Q91Z69 1062 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ciao1Q99KN2 339 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ppil4Q9CXG3 492 aaKnown RBP16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Add3Q9QYB5 706 aaKnown RBP16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Krt85Q9Z2T6 507 aa16.49■□□□□ 0.23
Lime1-201ENSMUST00000048077 Adcy5P84309 1262 aa16.48■□□□□ 0.23
Lime1-201ENSMUST00000048077 Cnnm3Q32NY4 713 aa16.48■□□□□ 0.23
Lime1-201ENSMUST00000048077 Vps54Q5SPW0 977 aa16.48■□□□□ 0.23
Lime1-201ENSMUST00000048077 Tceanc2Q8R2M0 207 aa16.48■□□□□ 0.23
Lime1-201ENSMUST00000048077 Lrrfip2Q91WK0 415 aa16.48■□□□□ 0.23
Lime1-201ENSMUST00000048077 Gsdma2Q32M21 443 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Gzf1Q4VBD9 706 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Mylk2Q8VCR8 613 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Cfap157Q0VFX2 523 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ctdnep1Q3TP92 244 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Smarcc2Q6PDG5 1213 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ptcd1Q8C2E4 695 aaKnown RBP16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ints5Q8CHT3 1018 aa16.47■□□□□ 0.23
Lime1-201ENSMUST00000048077 Cspp1B2RX88 1205 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 NcapgE9PWG6 1004 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Eya2O08575 532 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Tpm3P21107 285 aaKnown RBP16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Shank3Q4ACU6 1730 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Ddx46Q569Z5 1032 aaKnown RBP16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Jarid2Q62315 1234 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Mknk2Q8CDB0 459 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 PappaQ8R4K8 1624 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Krt25Q8VCW2 446 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Fam213aQ9CYH2 218 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Sipa1l3G3X9J0 1776 aa16.46■□□□□ 0.23
Lime1-201ENSMUST00000048077 Mcm3P25206 812 aaKnown RBP16.46■□□□□ 0.22
Lime1-201ENSMUST00000048077 Usp25P57080 1055 aa16.46■□□□□ 0.22
Lime1-201ENSMUST00000048077 Limch1Q3UH68 1057 aa16.46■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ndufa8Q9DCJ5 172 aa16.46■□□□□ 0.22
Lime1-201ENSMUST00000048077 Utp3Q9JI13 469 aaKnown RBP16.46■□□□□ 0.22
Lime1-201ENSMUST00000048077 Zkscan7E9PVW1 718 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 Myd88P22366 296 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 Babam1Q3UI43 333 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ano1Q8BHY3 960 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 Iffo2Q8R2V2 512 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 BrapQ99MP8 591 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 LratQ9JI60 231 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 Mx2Q9WVP9 655 aa16.45■□□□□ 0.22
Lime1-201ENSMUST00000048077 Kdm3aQ6PCM1 1323 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Gm21680A0A0G2JGR8 267 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Tex2Q6ZPJ0 1128 aaKnown RBP16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Asap2Q7SIG6 958 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ccdc158Q8CDI6 1109 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ppp4r3bQ922R5 820 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ltb4r2Q9JJL9 360 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Sytl4Q9R0Q1 673 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Col4a1P02463 1669 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms