RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Ranbp1P34022 203 aaKnown RBP9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Mex3cQ05A36 652 aaKnown RBP9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Lins1Q3U1D0 764 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Fbxw10Q5SUS0 1030 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ccdc38Q8CDN8 563 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 SnrkQ8VDU5 748 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ddx41Q91VN6 622 aaKnown RBP9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 CenpqQ9CPQ5 267 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Letm1Q9Z2I0 738 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cep135Q6P5D4 1140 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Tsr2Q8C8T8 191 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Plcd1Q8R3B1 756 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Mrpl50Q8VDT9 159 aaKnown RBP9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Syt10Q9R0N4 523 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ak2Q9WTP6 239 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cfap58B2RW38 873 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cfdp1O88271 295 aaKnown RBP9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Tmem165P52875 323 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Tlr7P58681 1050 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 C1qtnf12Q8R2Z0 308 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cabp4Q8VHC5 271 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Zkscan5Q9Z1D8 819 aa9.67□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cyp2d11P24457 504 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Zap70P43404 618 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 FanccP50652 591 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Rnf20Q5DTM8 973 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 CoilQ5SU73 570 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cyp2d12Q8BVD2 504 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Taf5lQ91WQ5 589 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Srgap1Q91Z69 1062 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ccdc97Q9DBT3 340 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cps1Q8C196 1500 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Pus7B7ZNL8 666 aaKnown RBP9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Trim55G3X8Y1 545 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Atf7Q8R0S1 413 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cgref1Q8R1U2 281 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Dnaaf4Q8R368 420 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Tlcd1Q99JT6 247 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Chaf1aQ9QWF0 911 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Rai14Q9EP71 979 aaKnown RBP9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Osbpl5Q9ER64 874 aa9.66□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Kansl3A2RSY1 903 aaKnown RBP9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Fam228bQ497Q6 232 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Dennd6aQ8BH65 605 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Phf20l1Q8CCJ9 1013 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ubxn4Q8VCH8 506 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Tubb6Q922F4 447 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 HnrnpmQ9D0E1 729 aaKnown RBP9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Rmi1Q9D4G9 616 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 1700113H08RikE9Q9Q5 327 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ess2O70279 479 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Bend3Q6PAL0 825 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 HomezQ80W88 542 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Dnaaf2Q8BPI1 814 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Polr3dQ91WD1 398 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 ZwintQ9CQU5 252 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Creld2Q9CYA0 350 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Echdc1Q9D9V3 322 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Styxl1Q9DAR2 321 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Pik3c2bE9QAN8 1632 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Trpm3Q5F4S9 1721 aa9.65□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Exoc6bA6H5Z3 810 aa9.65□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ubxn10Q8BG34 277 aa9.65□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Me3Q8BMF3 604 aa9.65□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Dnai2A2AC93 623 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tpm1P58771 284 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Lrrc8aQ80WG5 810 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Mphosph10Q810V0 681 aaKnown RBP9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tceanc2Q8R2M0 207 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Vps33aQ9D2N9 598 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 NalcnQ8BXR5 1738 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 TfrcQ62351 763 aaKnown RBP9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Abcc4E9Q236 1325 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Tsen34Q8BMZ5 316 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Rps6kb1Q8BSK8 525 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Iffo2Q8R2V2 512 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Apbb1ipQ8R5A3 670 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Myo1cQ9WTI7 1063 aa9.64□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Aox4Q3TYQ9 1336 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ptpn23Q6PB44 1692 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Gm21190A0A0G2JGJ6 266 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Csrnp1P59054 583 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Map3k13Q1HKZ5 959 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Gsdma3Q5Y4Y6 464 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Zpr1Q62384 459 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ano10Q8BH79 659 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Slu7Q8BHJ9 585 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Hook1Q8BIL5 728 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Fam193aQ8CGI1 1231 aaKnown RBP9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Mageb16Q9CWV4 363 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Clec11aO88200 328 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Mtx1P47802 317 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Frat1P70339 274 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ap5z1Q3U829 807 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Q3UJC8 639 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ano1Q8BHY3 960 aa9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Smc2Q8CG48 1191 aaKnown RBP9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Chd2E9PZM4 1827 aaKnown RBP9.63□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Arglu1Q3UL36 271 aaKnown RBP9.62□□□□□ -0.87
Cdc40-201ENSMUST00000044166 Ubash3aQ3V3E1 624 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms