RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Ciapin1Q8WTY4 309 aa10.69□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 AW822073A0A0N4SUK1 652 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 PaoxQ8C0L6 504 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Cep57l1Q8VDS7 400 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Syde2E9PUP1 1314 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Larp1Q6ZQ58 1072 aaKnown RBP10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Erich6bQ9D4S6 220 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 NhsB1AV60 1647 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Il15P48346 162 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 PogkQ80TC5 607 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Slc4a8Q8JZR6 1089 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Matr3Q8K310 846 aaKnown RBP10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Adarb2Q9JI20 745 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tmod4Q9JLH8 345 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Ccdc183A2AJB1 534 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Cnnm2Q3TWN3 875 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Elf1Q60775 612 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Hand2Q61039 217 aa10.68□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Pagr1bF6V0H0 108 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Snap23O09044 210 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Mapkapk5O54992 473 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tekt3Q6X6Z7 490 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Hook2Q7TMK6 716 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Pagr1aQ99L02 253 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Robo2Q7TPD3 1470 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Dip2cE9PWR4 1557 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Mroh2aD3Z750 1679 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Prr5lA2AVJ5 370 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Ubxn4Q8VCH8 506 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 WaslQ91YD9 501 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 En2P09066 324 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Eif4a1P60843 406 aaKnown RBP10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tfcp2l1Q3UNW5 479 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Prpf4bQ61136 1007 aaKnown RBP10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Clcn1Q64347 994 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Gigyf1Q99MR1 1044 aaKnown RBP10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Abca8bQ8K440 1620 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Atf7ipQ7TT18 1306 aa10.67□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Pls1Q3V0K9 630 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Bst2Q8R2Q8 172 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Clip2Q9Z0H8 1047 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Nkx1-1G3UXB3 402 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Pa2g4P50580 394 aaKnown RBP10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Stk11ipQ3TAA7 1072 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Lrrfip1Q3UZ39 729 aaKnown RBP10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Mylk2Q8VCR8 613 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Pip4k2aO70172 405 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Atp8b2P98199 1209 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Usp21Q9QZL6 566 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Col20a1Q923P0 1320 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Plxnc1Q9QZC2 1574 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Gm16486A0A1D5RMD1 1434 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Gm15262A0A140LIQ5 728 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tnnt2P50752 301 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Grm1P97772 1199 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Snx25Q3ZT31 840 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Smarcc2Q6PDG5 1213 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Triml1Q8BVP1 470 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tango6Q8C3S2 1079 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Lrrc45Q8CIM1 670 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Hps4Q99KG7 671 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 WtapQ9ER69 396 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Noc2lQ9WV70 747 aaKnown RBP10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Rims2Q9EQZ7 1530 aa10.66□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Vamp4O70480 141 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Atp8a2P98200 1148 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 AdpgkQ8VDL4 496 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Iqca1Q9CUL5 857 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Cnksr1A2A9K7 700 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Map7d2A2AG50 781 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 RdxP26043 583 aaKnown RBP10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Cacna2d4Q5RJF7 1116 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Jarid2Q62315 1234 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Uggt1Q6P5E4 1551 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tpx2A2APB8 745 aaKnown RBP10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 HmmrQ00547 794 aaKnown RBP10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Tbc1d2bQ3U0J8 965 aa10.65□□□□□ -0.7
Sf3b3-201ENSMUST00000042012 Gm4758L7N258 96 aa10.65□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 AcrbpQ3V140 540 aa10.65□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Kif22Q3V300 660 aa10.65□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Zbtb40Q6PCS8 1258 aa10.65□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 SltmQ8CH25 1031 aaKnown RBP10.65□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Flt1P35969 1333 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 AlkP97793 1621 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Oas2E9Q9A9 742 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Kcnj4P52189 445 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Rad23bP54728 416 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Map9Q3TRR0 646 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Eme2Q56A04 373 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Sycp1Q62209 993 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Stac3Q8BZ71 360 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Ccdc9Q8VC31 543 aaKnown RBP10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Strip1Q8C079 837 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Lrrfip2Q91WK0 415 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Zbtb43Q9DAI4 467 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Rims1Q99NE5 1463 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Cdcp1Q5U462 833 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 CsadQ9DBE0 493 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Bcar3Q9QZK2 820 aa10.64□□□□□ -0.71
Sf3b3-201ENSMUST00000042012 Ube4aE9Q735 1028 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms