RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ano1Q8BHY3 960 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 PhaxQ9JJT9 385 aaKnown RBP17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 Zeb2Q9R0G7 1215 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 Aox4Q3TYQ9 1336 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 Thsd7aQ69ZU6 1645 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 Csrnp1P59054 583 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 IbspQ61711 324 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Sass6Q80UK7 654 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Nek11Q8C0Q4 628 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Fam13bQ8K2H3 851 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Adam1bQ8R534 806 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Bicd2Q921C5 820 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Dhx30Q99PU8 1217 aaKnown RBP17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Pdzd9Q9D9M4 266 aa17.71■□□□□ 0.42
Nup54-201ENSMUST00000038514 Col15a1O35206 1367 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Kansl3A2RSY1 903 aaKnown RBP17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Atp2b3Q0VF55 1220 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Gpatch11Q3UFS4 262 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Adora1Q60612 326 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tsen34Q8BMZ5 316 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 R3hcc1Q8BSI6 488 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Zfp317Q8C0Q5 607 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tlcd1Q99JT6 247 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Ifi35Q9D8C4 286 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Wdr17E9Q271 1322 aa17.7■□□□□ 0.42
Nup54-201ENSMUST00000038514 Usp28Q5I043 1051 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Sh3bgrQ9WUZ7 214 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Ubr2Q6WKZ8 1755 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tnks1bp1P58871 1720 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Rbbp8nlA2ABX0 614 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Ano6Q6P9J9 911 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Osbpl5Q9ER64 874 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Unc13bQ9Z1N9 1602 aa17.69■□□□□ 0.42
Nup54-201ENSMUST00000038514 Cfap58B2RW38 873 aa17.68■□□□□ 0.42
Nup54-201ENSMUST00000038514 Iqsec3Q3TES0 1195 aa17.68■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tns3Q5SSZ5 1440 aa17.68■□□□□ 0.42
Nup54-201ENSMUST00000038514 Jarid2Q62315 1234 aa17.68■□□□□ 0.42
Nup54-201ENSMUST00000038514 Fbxo2Q80UW2 297 aa17.68■□□□□ 0.42
Nup54-201ENSMUST00000038514 Ccz1Q8C1Y8 480 aa17.68■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tmem87bQ8BKU8 555 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Bcl9Q9D219 1425 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Irgm2A0A140LIF8 407 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Ttll7A4Q9F0 912 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Gm10471E9Q1C7 252 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 TrdnE9Q9K5 693 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Hspa2P17156 633 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tmem109Q3UBX0 243 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Zfp91Q62511 572 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Kiaa0753Q6A000 959 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Smarcc2Q6PDG5 1213 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Iffo2Q8R2V2 512 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Lrrfip2Q91WK0 415 aa17.67■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tnnt2P50752 301 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 GpkowQ56A08 488 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Plppr3Q7TPB0 716 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Usp44Q8C2S0 711 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Nlrp3Q8R4B8 1033 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Cbx1P83917 185 aaKnown RBP17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Morc2aQ69ZX6 1030 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Ptcd1Q8C2E4 695 aaKnown RBP17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Mtmr3Q8K296 1196 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Syt10Q9R0N4 523 aa17.66■□□□□ 0.42
Nup54-201ENSMUST00000038514 Casz1Q9CWL2 1761 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 MypnQ5DTJ9 1315 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Tns2Q8CGB6 1400 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Dync1i1O88485 628 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Neurod6P48986 337 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Limch1Q3UH68 1057 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Dhx38Q80X98 1228 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Dixdc1Q80Y83 711 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 FocadA2AKG8 1798 aa17.65■□□□□ 0.42
Nup54-201ENSMUST00000038514 Clec11aO88200 328 aa17.64■□□□□ 0.41
Nup54-201ENSMUST00000038514 Vps54Q5SPW0 977 aa17.64■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ripor2Q80U16 1078 aa17.64■□□□□ 0.41
Nup54-201ENSMUST00000038514 Dis3l2Q8CI75 870 aaKnown RBP17.64■□□□□ 0.41
Nup54-201ENSMUST00000038514 Dnaaf2Q8BPI1 814 aa17.64■□□□□ 0.41
Nup54-201ENSMUST00000038514 Mb21d2Q8C525 428 aa17.64■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ifit1Q64282 463 aa17.63■□□□□ 0.41
Nup54-201ENSMUST00000038514 GphnQ8BUV3 769 aaKnown RBP17.63■□□□□ 0.41
Nup54-201ENSMUST00000038514 Abca3Q8R420 1704 aa17.63■□□□□ 0.41
Nup54-201ENSMUST00000038514 NmiO35309 314 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ddx46Q569Z5 1032 aaKnown RBP17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Kiaa0754Q69ZZ9 979 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Prkab2Q6PAM0 271 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ccdc158Q8CDI6 1109 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Chrna2Q91X60 512 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Pcdhb15Q91Y04 786 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Prl7a2O54831 253 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 FosbP13346 338 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Mrpl44Q9CY73 333 aaKnown RBP17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 Phkg2Q9DB30 406 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 TefQ9JLC6 301 aa17.62■□□□□ 0.41
Nup54-201ENSMUST00000038514 U2af2P26369 475 aaKnown RBP17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 Rrp1P56183 494 aaKnown RBP17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 Cnnm1Q0GA42 951 aa17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 ThemisQ8BGW0 636 aa17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ubxn4Q8VCH8 506 aa17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 Nfatc2ipO09130 412 aa17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 Stx1aO35526 288 aa17.61■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ccdc112A0AUP1 442 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms