RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Gucy1a3Q9ERL9 691 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Golga5Q9QYE6 729 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ddx23D3Z0M9 819 aaKnown RBP26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Serpinc1P32261 465 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Spg7Q3ULF4 781 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 SfswapQ3USH5 945 aaKnown RBP26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ano6Q6P9J9 911 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Trak2Q6P9N8 913 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Dclk3Q8BWQ5 790 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ankle2Q6P1H6 964 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 ApobrQ8VBT6 942 aa26.32■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 AcrbpQ3V140 540 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Zkscan5Q9Z1D8 819 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Hmgb2P30681 210 aaKnown RBP26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Chpf2Q3UU43 768 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Kif5bQ61768 963 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ano1Q8BHY3 960 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ubxn1Q922Y1 297 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Apol7cQ8C6E1 369 aa26.31■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Tbc1d7Q9D0K0 293 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ccdc152E9PX14 254 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Pde3aQ9Z0X4 1141 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Q3UJC8 639 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 EappQ5BU09 281 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Afap1Q80YS6 731 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Zmym3Q9JLM4 1370 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Taok3Q8BYC6 898 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Exoc1Q8R3S6 894 aa26.3■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ccdc6D3YZP9 469 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Cdr2P97817 455 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Sdccag8Q80UF4 717 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Gm3409A0A0G2JE67 319 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 ZfxP17012 799 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Anp32cQ64G17 123 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 WtapQ9ER69 396 aa26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Rbm33Q9CXK9 1231 aaKnown RBP26.29■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Cbfa2t2O70374 594 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Rufy3Q9D394 469 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ppp4r3aQ6P2K6 820 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Bicd1Q8BR07 835 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Q9D5Q8 446 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 SynmQ70IV5 1561 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ranbp1P34022 203 aaKnown RBP26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Tsga10Q6NY15 697 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Kdm4cQ8VCD7 1054 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Izumo3A6PWV3 263 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Tbc1d5Q80XQ2 815 aa26.28■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Oas2E9Q9A9 742 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Myd88P22366 296 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ctdp1Q7TSG2 960 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Micall1Q8BGT6 870 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Maip1Q8BHE8 291 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Spats2Q8K1N4 545 aaKnown RBP26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Mcmdc2E9Q956 681 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Speer4dL7N216 212 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Pnpla2Q8BJ56 486 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Rbbp8nlA2ABX0 614 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Eftud2O08810 971 aaKnown RBP26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ift74Q8BKE9 600 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Ccdc91Q9D8L5 442 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Cwc25Q9DBF7 416 aa26.27■■□□□ 1.8
Sh3rf1-201ENSMUST00000034060 Gbp7Q91Z40 638 aa26.26■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Armc9Q9D2I5 817 aa26.26■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Fam160b2Q80YR2 744 aa26.26■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Fmnl3Q6ZPF4 1028 aa26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Zbtb43Q9DAI4 467 aa26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Aimp1P31230 310 aaKnown RBP26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 BrapQ99MP8 591 aa26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Bcl11bQ99PV8 884 aa26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Prim1P20664 417 aa26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 SltmQ8CH25 1031 aaKnown RBP26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Krt8P11679 490 aaKnown RBP26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Mcm5P49718 733 aa26.25■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Gjc1P28229 396 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Pdzrn3Q69ZS0 1063 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Ift122Q6NWV3 1182 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Map3k9Q3U1V8 1077 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Triml1Q8BVP1 470 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Slc5a1Q8C3K6 665 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Igf1rQ60751 1373 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Gm7347D3YYI9 267 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 GnaqP21279 359 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Ccdc157Q5SPX1 718 aa26.24■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Camsap1A2AHC3 1581 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Ankrd26Q811D2 1581 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Il4rP16382 810 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Sept7O55131 436 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Sun3Q5SS91 320 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Hand2Q61039 217 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Smarcc2Q6PDG5 1213 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Fermt2Q8CIB5 680 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Rdm1Q9CQK3 281 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Pde4dQ01063 747 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Rapgef3Q8VCC8 918 aa26.23■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Zfp213E9QAW0 468 aa26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Clec11aO88200 328 aa26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Kif5cP28738 956 aaKnown RBP26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Ankrd24Q80VM7 985 aa26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Cnot6lQ8VEG6 555 aa26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Specc1lQ2KN98 1118 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms