RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Actr5Q80US4 605 aaKnown RBP16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 PalmQ9Z0P4 383 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Eps15P42567 897 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Naip1Q9QWK5 1403 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Mcm4P49717 862 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 SfswapQ3USH5 945 aaKnown RBP16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Apol10bG3X9K7 334 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Krt8P11679 490 aaKnown RBP16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Znf653Q6YND2 615 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Dync1i1O88485 628 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Slc5a1Q8C3K6 665 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Arhgef6Q8K4I3 771 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Egfl6Q9JJZ5 550 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Pabpn1lQ5XFR0 273 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Sept14Q9DA97 430 aa16.34■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Stim2P83093 746 aa16.33■□□□□ 0.21
Col7a1-201ENSMUST00000026740 TchpQ3TVW5 497 aa16.33■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Maco1Q7TQE6 664 aaKnown RBP16.33■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Cep83Q9D5R3 692 aa16.33■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Dapk3O54784 448 aa16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Tpcn1Q9EQJ0 817 aa16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Stmn1P54227 149 aaKnown RBP16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ccdc66Q6NS45 935 aa16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Gnat3Q3V3I2 354 aa16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ddx54Q8K4L0 874 aaKnown RBP16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Taf7lQ9D3R9 471 aa16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Plekho1Q9JIY0 408 aa16.33■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Snx25Q3ZT31 840 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 HomezQ80W88 542 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Stoml1Q8CI66 399 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Trpc3Q9QZC1 836 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Fsip1Q9D3V5 435 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Krt90E9Q1Z0 538 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Krt13P08730 437 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 ArsiQ32KI9 573 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Cplx4Q80WM3 160 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ccdc94Q9D6J3 314 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 PrkcshO08795 521 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Slc1a4O35874 532 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Kifap3P70188 793 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Sdad1Q80UZ2 687 aaKnown RBP16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ppp1r42Q8R1Z4 357 aa16.32■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Cpa2Q504N0 417 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Tbc1d31Q6NXY1 996 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ccdc186Q8C9S4 917 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Rfx7F8VPJ6 1459 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Taf4bG5E8Z2 855 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ppp1r21Q3TDD9 780 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Micall1Q8BGT6 870 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 SncbQ91ZZ3 133 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Cracr2aQ3UP38 310 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 EappQ5BU09 281 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Tmem87aQ8BXN9 555 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Nup62clA2AG10 272 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Armc3A2AU72 881 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Hmgb3O54879 200 aaKnown RBP16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Zfp213E9QAW0 468 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ccdc174Q3U155 467 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Gnat2P50149 354 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 NexmifQ5DTT1 1515 aa16.31■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Calm1P0DP26 149 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Calm2P0DP27 149 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Calm3P0DP28 149 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Gm7347D3YYI9 267 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Dclk3Q8BWQ5 790 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Pcdhb2Q91Y00 799 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Zscan29E9Q5B4 869 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Taok1Q5F2E8 1001 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ccdc14Q8K2J4 934 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Vps18Q8R307 973 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 PogzQ8BZH4 1409 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Akap8Q9DBR0 687 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Clasp2Q8BRT1 1286 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Gapvd1Q6PAR5 1458 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Krt77Q6IFZ6 572 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ankle2Q6P1H6 964 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Tfip11Q9ERA6 838 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Prkar2bP31324 416 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Spats2Q8K1N4 545 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Nop56Q9D6Z1 580 aaKnown RBP16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Zbtb43Q9DAI4 467 aa16.3■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Rad50P70388 1312 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Myh10Q61879 1976 aaKnown RBP16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Urb2E9Q7L1 1524 aaKnown RBP16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Vps41Q5KU39 853 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 RpgrQ9R0X5 1001 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Tldc2A2ACG1 198 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Tsga10Q6NY15 697 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 RbsnQ80Y56 783 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Pcf11G3X9Z4 1553 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Cavin2Q63918 418 aaKnown RBP16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Znf18Q810A1 556 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 DmtnQ9WV69 405 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Rpl13P47963 211 aaKnown RBP16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Ints8Q80V86 995 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Rassf4Q8CB96 322 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Mpp4Q6P7F1 635 aa16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Nap1l4Q78ZA7 375 aaKnown RBP16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Lonp1Q8CGK3 949 aaKnown RBP16.29■□□□□ 0.2
Col7a1-201ENSMUST00000026740 Gipc1Q9Z0G0 333 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms