RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Gm18336A0A140LIU8 765 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 SlkO54988 1233 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Hspa1lP16627 641 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Pde3bQ61409 1100 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Miga2Q8BK03 593 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Myh1Q5SX40 1942 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Cacna1sQ02789 1880 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 MecomP14404 1042 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Cers3Q1A3B0 383 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Smc4Q8CG47 1286 aa10.97□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Zfp804bA0A0G2JGH6 1343 aa10.96□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Gnl3lQ6PGG6 577 aaKnown RBP10.96□□□□□ -0.65
Cldn1-201ENSMUST00000023154 PogkQ80TC5 607 aa10.96□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Nlrp3Q8R4B8 1033 aa10.96□□□□□ -0.65
Cldn1-201ENSMUST00000023154 Smarce1O54941 411 aaKnown RBP10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Gpr182P43142 395 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Pm20d1Q8C165 503 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Mb21d2Q8C525 428 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Prr5lA2AVJ5 370 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Cops6O88545 324 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ggt6Q6PDE7 497 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Asap2Q7SIG6 958 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ciao1Q99KN2 339 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ccne2Q9Z238 404 aa10.96□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ftl2P49945 183 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Pde4dQ01063 747 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Rab3gap1Q80UJ7 981 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Nol12Q8BG17 217 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Bmp2kQ91Z96 1138 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Syt1P46096 421 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Plcb3P51432 1234 aaKnown RBP10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Lmbrd2Q8C561 694 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Nphp3Q7TNH6 1325 aa10.95□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Atp6v1dP57746 247 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ddx19aQ61655 478 aaKnown RBP10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Kank4Q6P9J5 1016 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Q9D9S1 216 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 IncenpQ9WU62 880 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Foxo4Q9WVH3 505 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Rbm27Q5SFM8 1060 aaKnown RBP10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 St18Q80TY4 1045 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Zkscan8Q8BSL0 588 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Gadd45bP22339 160 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Gsdma2Q32M21 443 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 RubcnlQ3TD16 648 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Sf3b2Q3UJB0 878 aaKnown RBP10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Nek11Q8C0Q4 628 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 SnrkQ8VDU5 748 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Lrrfip2Q91WK0 415 aa10.94□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Casz1Q9CWL2 1761 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Nol10Q5RJG1 687 aaKnown RBP10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Krt25Q8VCW2 446 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Rapgef4Q9EQZ6 1011 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Zbtb38Q3LR78 1197 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Cyp7a1Q64505 503 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Sgsm1Q8BPQ7 1093 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Tsr2Q8C8T8 191 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Rbm17Q8JZX4 405 aaKnown RBP10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Atf7Q8R0S1 413 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Trip6Q9Z1Y4 480 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Lrp5Q91VN0 1614 aa10.93□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Susd4Q8BH32 490 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 DpydQ8CHR6 1025 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Klc3Q91W40 508 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 TnksQ6PFX9 1320 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Fkbp1aP26883 108 aaKnown RBP10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Esco1Q69Z69 843 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Tmx3Q8BXZ1 456 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Bicdl1A0JNT9 577 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Dctn1O08788 1281 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Prl7a2O54831 253 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ercc3P49135 783 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Bms1Q6PGF5 1284 aaKnown RBP10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Trim56Q80VI1 734 aaKnown RBP10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Rps6kb1Q8BSK8 525 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Slc5a4bQ91ZP4 660 aa10.92□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Gm9992B2RWK3 458 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Bin2D3Z6Q9 489 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Cyp2c23E9Q5K4 494 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Slf2Q6P9P0 1278 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Unc93aQ710D3 458 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Tmem266Q8BZB3 538 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 GakQ99KY4 1305 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Nhsl1Q8CAF4 1587 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Lama4P97927 1816 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Itga6Q61739 1091 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ptcd1Q8C2E4 695 aaKnown RBP10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Ltbp1Q8CG19 1712 aa10.91□□□□□ -0.66
Cldn1-201ENSMUST00000023154 TsksO54887 585 aa10.9□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Usp44Q8C2S0 711 aa10.9□□□□□ -0.66
Cldn1-201ENSMUST00000023154 PhaxQ9JJT9 385 aaKnown RBP10.9□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Sh3bp5Q9Z131 463 aa10.9□□□□□ -0.66
Cldn1-201ENSMUST00000023154 Kcnq3Q8K3F6 873 aa10.9□□□□□ -0.66
Cldn1-201ENSMUST00000023154 AU015836B2RUM3 263 aa10.9□□□□□ -0.67
Cldn1-201ENSMUST00000023154 1700006A11RikB9EHI3 544 aa10.9□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Cyp3a57D3YYZ0 503 aa10.9□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Atp8a2P98200 1148 aa10.9□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Atp2b3Q0VF55 1220 aa10.9□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Smc3Q9CW03 1217 aaKnown RBP10.9□□□□□ -0.67
Cldn1-201ENSMUST00000023154 Vps33bP59016 617 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms