RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Eya2O08575 532 aa13.99□□□□□ -0.17
Trim35-201ENSMUST00000022623 Abl1P00520 1123 aa13.99□□□□□ -0.17
Trim35-201ENSMUST00000022623 Cct2P80314 535 aaKnown RBP13.99□□□□□ -0.17
Trim35-201ENSMUST00000022623 Bms1Q6PGF5 1284 aaKnown RBP13.99□□□□□ -0.17
Trim35-201ENSMUST00000022623 Sugp2Q8CH09 1067 aa13.99□□□□□ -0.17
Trim35-201ENSMUST00000022623 Lekr1B2RVN1 116 aa13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Ltb4r2Q9JJL9 360 aa13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Nup153E9Q3G8 1462 aaKnown RBP13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Nfat5Q9WV30 1534 aa13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Mon2Q80TL7 1715 aa13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 AidaQ8C4Q6 305 aa13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Atf7Q8R0S1 413 aa13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Ahnak2E9PYB0 1738 aaKnown RBP13.98□□□□□ -0.17
Trim35-201ENSMUST00000022623 Hoxa7P02830 229 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Kif4P33174 1231 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Utp18Q5SSI6 552 aaKnown RBP13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Zkscan8Q8BSL0 588 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Lrrfip2Q91WK0 415 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Pde4bB1AWC9 736 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Ugt1a5B2RT14 529 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Rbm5Q91YE7 815 aaKnown RBP13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Atp2b3Q0VF55 1220 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Ccdc66Q6NS45 935 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Slfnl1Q8BHW9 410 aa13.97□□□□□ -0.17
Trim35-201ENSMUST00000022623 Syt1P46096 421 aa13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Fsd1Q7TPM6 496 aa13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Dnajc2P54103 621 aaKnown RBP13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Lmod1Q8BVA4 595 aa13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Trim52Q8CDV4 233 aa13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Pms1Q8K119 917 aa13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Stx6Q9JKK1 255 aa13.96□□□□□ -0.17
Trim35-201ENSMUST00000022623 Ppp4r3aQ6P2K6 820 aa13.96□□□□□ -0.18
Trim35-201ENSMUST00000022623 Samm50Q8BGH2 469 aa13.96□□□□□ -0.18
Trim35-201ENSMUST00000022623 Lrrc59Q922Q8 307 aaKnown RBP13.96□□□□□ -0.18
Trim35-201ENSMUST00000022623 Rbm33Q9CXK9 1231 aaKnown RBP13.96□□□□□ -0.18
Trim35-201ENSMUST00000022623 NpeppsQ11011 920 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 PnnO35691 725 aaKnown RBP13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Il4rP16382 810 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Nlrp9bQ66X22 1003 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Morc2aQ69ZX6 1030 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Dnajc14Q921R4 703 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Slit2Q9R1B9 1521 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Agtpbp1Q641K1 1218 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Bicd2Q921C5 820 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ccer1Q9CQL2 403 aa13.95□□□□□ -0.18
Trim35-201ENSMUST00000022623 Smarcc1P97496 1104 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ddx19aQ61655 478 aaKnown RBP13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Pram1Q6BCL1 675 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ccdc158Q8CDI6 1109 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Naa30Q8CES0 364 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Rufy3Q9D394 469 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 TnksQ6PFX9 1320 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Gm45015A0A140LII9 184 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Gm18336A0A140LIU8 765 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Prl3d2F6R3P9 224 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Vwa3bJ9JI28 736 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Esco1Q69Z69 843 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Kank4Q6P9J5 1016 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Zbtb21E9Q444 1094 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 R3hcc1Q8BSI6 488 aa13.94□□□□□ -0.18
Trim35-201ENSMUST00000022623 Atp10bB1AWN4 1474 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Pkp1P97350 728 aaKnown RBP13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ccdc129Q14B48 1034 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Sgsm1Q8BPQ7 1093 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 CpvlQ9D3S9 478 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Utp3Q9JI13 469 aaKnown RBP13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ftl2P49945 183 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ankrd23Q812A3 306 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ginm1Q91WR6 327 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Prl7a2O54831 253 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Nek11Q8C0Q4 628 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 NaspQ99MD9 773 aaKnown RBP13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Gigyf1Q99MR1 1044 aaKnown RBP13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Arfgef2A2A5R2 1792 aa13.93□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ptpn23Q6PB44 1692 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Rbm27Q5SFM8 1060 aaKnown RBP13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Itga6Q61739 1091 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Mcm3P25206 812 aaKnown RBP13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ell2Q3UKU1 639 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Tmem266Q8BZB3 538 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Dhx16G3X8X0 1044 aaKnown RBP13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Dmrt2Q8BG36 561 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Pm20d1Q8C165 503 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 IncenpQ9WU62 880 aa13.92□□□□□ -0.18
Trim35-201ENSMUST00000022623 Gpr182P43142 395 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Zc3h12cQ5DTV4 884 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 NfkbibQ60778 359 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Ybx3Q9JKB3 361 aaKnown RBP13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Sh3bgrQ9WUZ7 214 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Lmtk3Q5XJV6 1424 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Chrm1P12657 460 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Slx1bQ8BX32 270 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Tmc2Q8R4P4 888 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Tmem143Q8VD26 458 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Stac3Q8BZ71 360 aa13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Mrpl50Q8VDT9 159 aaKnown RBP13.91□□□□□ -0.18
Trim35-201ENSMUST00000022623 Mst1rQ62190 1378 aa13.9□□□□□ -0.18
Trim35-201ENSMUST00000022623 Me1P06801 572 aa13.9□□□□□ -0.18
Trim35-201ENSMUST00000022623 Casp1P29452 402 aa13.9□□□□□ -0.18
Trim35-201ENSMUST00000022623 Pla2g4fQ50L41 855 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms