RNA–Protein interactions for RNA: ENSMUST00000012580.12

Hps3-201, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hps3, Length 4,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-201ENSMUST00000012580 Fam228bQ497Q6 232 aa14.66□□□□□ -0.06
Hps3-201ENSMUST00000012580 Pdzd9Q9D9M4 266 aa14.66□□□□□ -0.06
Hps3-201ENSMUST00000012580 Tecpr2Q3UH45 1423 aa14.66□□□□□ -0.06
Hps3-201ENSMUST00000012580 Sil1Q9EPK6 465 aa14.66□□□□□ -0.06
Hps3-201ENSMUST00000012580 Grpel1Q99LP6 217 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Efcab2Q9CQ46 164 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Anxa1P10107 346 aaKnown RBP14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Ccdc82Q6PG04 518 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 4930572O03RikQ8C5Y0 211 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 DpydQ8CHR6 1025 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Ccdc7Q9D541 371 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Lekr1B2RVN1 116 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Eif5P59325 429 aaKnown RBP14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 U2af1l4Q8BGJ9 220 aa14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 Mrpl44Q9CY73 333 aaKnown RBP14.65□□□□□ -0.06
Hps3-201ENSMUST00000012580 U2af2P26369 475 aaKnown RBP14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Dis3l2Q8CI75 870 aaKnown RBP14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 RereQ80TZ9 1558 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Gsdma2Q32M21 443 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ppp1r10Q80W00 888 aaKnown RBP14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Tmem87bQ8BKU8 555 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Tpm3-rs7D3Z2H9 248 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Zscan29E9Q5B4 869 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 DbnlQ62418 436 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Luzp1Q8R4U7 1068 aaKnown RBP14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Topbp1Q6ZQF0 1515 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Mybbp1aQ7TPV4 1344 aaKnown RBP14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Igsf1Q7TQA1 1317 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Spata31d1bE9QA57 1361 aa14.64□□□□□ -0.07
Hps3-201ENSMUST00000012580 Map7d2A2AG50 781 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Trim25Q61510 634 aaKnown RBP14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Gm21985Q6P6P5 1106 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Lrrc2Q8VDB8 371 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Odf2lQ9D478 642 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Mx2Q9WVP9 655 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Rab3gap1Q80UJ7 981 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Cep55Q8BT07 462 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Lmod1Q8BVA4 595 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Rbm28Q8CGC6 750 aaKnown RBP14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Eif3bQ8JZQ9 803 aaKnown RBP14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Plcd1Q8R3B1 756 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Nxf2Q4ZGD8 691 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Nek11Q8C0Q4 628 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ddx54Q8K4L0 874 aaKnown RBP14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Oas2E9Q9A9 742 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Cfap157Q0VFX2 523 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ddx58Q6Q899 926 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Gnl2Q99LH1 728 aaKnown RBP14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Atg3Q9CPX6 314 aa14.63□□□□□ -0.07
Hps3-201ENSMUST00000012580 Tnni2P13412 182 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 Znf653Q6YND2 615 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 Pnma3Q8JZW8 466 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 Cdc42bpgQ80UW5 1551 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 DymQ8CHY3 669 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 Tubb6Q922F4 447 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 Hmg20bQ9Z104 317 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ccdc112A0AUP1 442 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 NpeppsQ11011 920 aa14.62□□□□□ -0.07
Hps3-201ENSMUST00000012580 LyarQ08288 388 aaKnown RBP14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Prdm1Q60636 856 aa14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Mrvi1Q9WUX5 899 aaKnown RBP14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Frat1P70339 274 aa14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Myl10Q62082 202 aa14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Nxf7Q80SZ6 620 aaKnown RBP14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Arid5bQ8BM75 1188 aaKnown RBP14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Stxbp4Q9WV89 557 aa14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Znf335A2A5K6 1337 aa14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ankle2Q6P1H6 964 aa14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ddx27Q921N6 760 aaKnown RBP14.61□□□□□ -0.07
Hps3-201ENSMUST00000012580 NefhP19246 1090 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Mtx1P47802 317 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 CrklP47941 303 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 ApobrQ8VBT6 942 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Krt25Q8VCW2 446 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Ccdc47Q9D024 483 aaKnown RBP14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Cwc25Q9DBF7 416 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Cep135Q6P5D4 1140 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Parp14Q2EMV9 1817 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Stx1aO35526 288 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Phkg2Q9DB30 406 aa14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Gemin5Q8BX17 1502 aaKnown RBP14.6□□□□□ -0.07
Hps3-201ENSMUST00000012580 Abcc4E9Q236 1325 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Dnajc25A2ALW5 357 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Zfp113Q8C689 439 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Card6E9PWH2 1175 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Dnm1P39053 867 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Zfp251Q6PCX8 632 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Pcdhb15Q91Y04 786 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Fam114a1Q9D281 569 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Cdc45Q9Z1X9 566 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 AceP09470 1312 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Asic4Q7TNS7 539 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Acnat2Q8BGG9 420 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Mtmr3Q8K296 1196 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Col1a2Q01149 1372 aa14.59□□□□□ -0.07
Hps3-201ENSMUST00000012580 Hoxa7P02830 229 aa14.58□□□□□ -0.07
Hps3-201ENSMUST00000012580 Kcnj4P52189 445 aa14.58□□□□□ -0.07
Hps3-201ENSMUST00000012580 L1td1Q587J6 782 aaKnown RBP14.58□□□□□ -0.07
Hps3-201ENSMUST00000012580 Qser1A2BIE1 1698 aa14.58□□□□□ -0.07
Hps3-201ENSMUST00000012580 Gm21969J3QJZ1 289 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms