RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Rnf216P58283 853 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Sdad1Q80UZ2 687 aaKnown RBP10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Klhl10Q9D5V2 608 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ccdc129Q14B48 1034 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Sept11Q8C1B7 431 aaKnown RBP10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Klhl30Q8C3F7 581 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ccdc6D3YZP9 469 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Cfap73J3QPZ5 306 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 AqrQ8CFQ3 1481 aaKnown RBP10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Slc1a4O35874 532 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 ZfxP17012 799 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Myo1bP46735 1107 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ccdc157Q5SPX1 718 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Zkscan4Q5SZT6 480 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 SkiQ60698 725 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Slf2Q6P9P0 1278 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Msantd4Q91YU3 345 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gtpbp4Q99ME9 634 aaKnown RBP10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Egfl6Q9JJZ5 550 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ncoa1P70365 1447 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gm28510A0A087WP28 240 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Krt8P11679 490 aaKnown RBP10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tspyl2Q7TQI8 677 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Haus1Q8BHX1 278 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 DonsonQ9QXP4 560 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 A2mQ6GQT1 1474 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rpl13P47963 211 aaKnown RBP10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ercc3P49135 783 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 RragbQ6NTA4 374 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rsrc1Q9DBU6 334 aa10.4□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Zscan29E9Q5B4 869 aa10.4□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Bicd1Q8BR07 835 aa10.4□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Aldh1l2Q8K009 923 aa10.4□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Exoc1Q8R3S6 894 aa10.4□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Naip2Q9QUK4 1447 aa10.4□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 TrdnE9Q9K5 693 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Apol10bG3X9K7 334 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Serpinb6bO08804 377 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Rad17Q6NXW6 688 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Micall1Q8BGT6 870 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ccdc91Q9D8L5 442 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Zbtb43Q9DAI4 467 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gm1993A6X8I0 212 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gpr161B2RPY5 545 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 SlxD3Z347 212 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Smarcad1Q04692 1021 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 U2af1l4Q8BGJ9 220 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Tpcn1Q9EQJ0 817 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gm7347D3YYI9 267 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gna11P21278 359 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 SbdsP70122 250 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ttc14Q9CSP9 761 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 AmfrQ9R049 643 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Cct2P80314 535 aaKnown RBP10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 BrapQ99MP8 591 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Bcar3Q9QZK2 820 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Znf394Q9Z1D9 521 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 TchhA0A0B4J1F9 1599 aa10.39□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ccdc152E9PX14 254 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ms4a1P19437 291 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Nsrp1Q5NCR9 542 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Luc7l2Q7TNC4 392 aaKnown RBP10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ebag9Q9D0V7 213 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Speer4f2E9Q366 295 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Sptlc2P97363 560 aaKnown RBP10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Smarcc2Q6PDG5 1213 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Smarca5Q91ZW3 1051 aaKnown RBP10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Atad3Q925I1 591 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Uspl1Q3ULM6 1089 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Kif5bQ61768 963 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ppp2r5bQ6PD28 497 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ccdc94Q9D6J3 314 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Magi1Q6RHR9 1471 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Dennd3A2RT67 1274 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Bin1O08539 588 aaKnown RBP10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Syt1P46096 421 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Exoc5Q3TPX4 708 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Slc12a5Q91V14 1138 aa10.38□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Zfp213E9QAW0 468 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Cdr2P97817 455 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Atp8b2P98199 1209 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Znf18Q810A1 556 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ccdc186Q8C9S4 917 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Matr3Q8K310 846 aaKnown RBP10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mug1P28665 1476 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Tldc2A2ACG1 198 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Dnm1P39053 867 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Kif17Q99PW8 1038 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gucy1a3Q9ERL9 691 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 JmyQ9QXM1 983 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Bfsp1A2AMT1 669 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Triml1Q8BVP1 470 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Stoml1Q8CI66 399 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Dydc2Q9D3X8 139 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Fam50bQ9WTJ8 334 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Stx8O88983 236 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 MycnP03966 462 aaKnown RBP10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Frat2Q8K025 231 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Atp2a1Q8R429 994 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Xrcc4Q924T3 326 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms