RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 ALKBH3Q96Q83 286 aaPredicted RBP6.73□□□□□ -1.33
PHGDH-217ENST00000641455 STACQ99469 402 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 MRPL37Q9BZE1 423 aaKnown RBP6.73□□□□□ -1.33
PHGDH-217ENST00000641455 DPH5Q9H2P9 285 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 PIGUQ9H490 435 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 NOX3Q9HBY0 568 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 CRLF2Q9HC73 371 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 MOV10Q9HCE1 1003 aaKnown RBP6.73□□□□□ -1.33
PHGDH-217ENST00000641455 CTPS2Q9NRF8 586 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 ZCCHC3Q9NUD5 404 aaKnown RBP6.73□□□□□ -1.33
PHGDH-217ENST00000641455 ACER3Q9NUN7 267 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 SH3BP4Q9P0V3 963 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 CRNNQ9UBG3 495 aaPredicted RBP6.73□□□□□ -1.33
PHGDH-217ENST00000641455 ZNF69Q9UC07 566 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 OPN4Q9UHM6 478 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 NUP50Q9UKX7 468 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 TIMM22Q9Y584 194 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 NOX1Q9Y5S8 564 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 KMT2CQ8NEZ4 4911 aaKnown RBP6.73□□□□□ -1.33
PHGDH-217ENST00000641455 ARHGAP32A7KAX9 2087 aa6.73□□□□□ -1.33
PHGDH-217ENST00000641455 ARPC4-TTLL3A0A0A6YYG9 625 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 A0A1W2PPW3 197 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 ETV2O00321 342 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 ANKRD28O15084 1053 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 NCR1O76036 304 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 GPANK1O95872 356 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 CSTAP01040 98 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 FSHBP01225 129 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 HMGN2P05204 90 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 CRYBA1P05813 215 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 GSNP06396 782 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 GATA3P23771 443 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 RYKP34925 604 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 APOBEC1P41238 236 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 ASMTP46597 345 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 SLC35A1P78382 337 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 LCN2P80188 198 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 POU3F1Q03052 451 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 SKP2Q13309 424 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 TP53BP2Q13625 1128 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 SLC9A3R2Q15599 337 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 ALKBH6Q3KRA9 238 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 C3orf36Q3SXR2 165 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 GLIPR1L2Q4G1C9 344 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 GKAP1Q5VSY0 366 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 GPAT4Q86UL3 456 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 RETREG3Q86VR2 466 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 WDFY1Q8IWB7 410 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 SLC35F6Q8N357 371 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 FAM110DQ8TAY7 271 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 BCL2L2Q92843 193 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 TMEM45BQ96B21 275 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 FAM120BQ96EK7 910 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 EGLN2Q96KS0 407 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 ZNF385AQ96PM9 386 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 KCNA7Q96RP8 456 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 ZNF382Q96SR6 550 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 RBM4BQ9BQ04 359 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 MS4A7Q9GZW8 240 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 LAT2Q9GZY6 243 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 MRPL46Q9H2W6 279 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 BEX1Q9HBH7 125 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 DUSP22Q9NRW4 184 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 TMEM181Q9P2C4 612 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 TESQ9UGI8 421 aaKnown RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 FZR1Q9UM11 496 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 SNX12Q9UMY4 172 aa6.72□□□□□ -1.33
PHGDH-217ENST00000641455 FAF1Q9UNN5 650 aaPredicted RBP6.72□□□□□ -1.33
PHGDH-217ENST00000641455 A0A1B0GUS0 222 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 HMX2A2RU54 273 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 ISPDA4D126 451 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 C3orf80F5H4A9 247 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 TPD52L2O43399 206 aaKnown RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 EIF1BO60739 113 aaKnown RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 DEAF1O75398 565 aaPredicted RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 RP2O75695 350 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 IGKV3-15P01624 115 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 IGHV2-5P01817 119 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 PRB2P02812 416 aaPredicted RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 ENO1P06733 434 aaKnown RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 VSIG8P0DPA2 414 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 NAT2P11245 290 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 CBR1P16152 277 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 ATP4BP51164 291 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 RAG2P55895 527 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 MRPS25P82663 173 aaKnown RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 MRPS11P82912 194 aaKnown RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 SLC17A1Q14916 467 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 GPR68Q15743 365 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 SPDYE7PQ495Y7 208 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 ATP6AP1LQ52LC2 224 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 UNC50Q53HI1 259 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 ZNF385BQ569K4 471 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 NOXRED1Q6NXP6 359 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 GRINAQ7Z429 371 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 LSRQ86X29 649 aaPredicted RBP6.71□□□□□ -1.34
PHGDH-217ENST00000641455 OR9K2Q8NGE7 335 aa6.71□□□□□ -1.34
PHGDH-217ENST00000641455 OR4F5Q8NH21 305 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms