RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TBCEQ15813 527 aaPredicted RBP12.83□□□□□ -0.36
CIITA-213ENST00000618327 VN1R4Q7Z5H5 301 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 SAMD12Q8N8I0 201 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 MED17Q9NVC6 651 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 SIP14410 1827 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 SEC16AO15027 2179 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 CENPBD1B2RD01 187 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 DISC1C4P0D8 188 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 H3BMQ9 156 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 RP2O75695 350 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 ACP2P11117 423 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 BCKDHBP21953 392 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 MMP11P24347 488 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 GDF1P27539 372 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 PPICP45877 212 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 ADARB1P78563 741 aaKnown RBP12.83□□□□□ -0.36
CIITA-213ENST00000618327 DUSP8Q13202 625 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 TP53I3Q53FA7 332 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 SLC25A25Q6KCM7 469 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 LRRN1Q6UXK5 716 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 MARCH3Q86UD3 253 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 BPHLQ86WA6 291 aaPredicted RBP12.83□□□□□ -0.36
CIITA-213ENST00000618327 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 COQ8AQ8NI60 647 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 COG8Q96MW5 612 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 ZNF285Q96NJ3 590 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 TSNAXQ99598 290 aaKnown RBP12.83□□□□□ -0.36
CIITA-213ENST00000618327 THSD7BQ9C0I4 1608 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 BCAS1O75363 584 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 OR7A10O76100 309 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 TFAP2AP05549 437 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 ITGA5P08648 1049 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 ZMYND11Q15326 602 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 GLT8D1Q68CQ7 371 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 ZNF425Q6IV72 752 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 POGLUT1Q8NBL1 392 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 NUDT22Q9BRQ3 303 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 FAIMQ9NVQ4 179 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 LRRN3E7EW58 273 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 LILRB5O75023 590 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 SOX3P41225 446 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 CD97P48960 835 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 CSNK2A1P68400 391 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 SEC23BQ15437 767 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 RAB11FIP2Q7L804 512 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 PRICKLE2Q7Z3G6 844 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 NKAIN4Q8IVV8 208 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 BCORP1Q8N888 145 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 NLGN4YQ8NFZ3 816 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 CDC6Q99741 560 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 RANBP3Q9H6Z4 567 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 FBXO9Q9UK97 447 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 IGHV5-51A0A0C4DH38 117 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 FCER2P06734 321 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 S100A12P80511 92 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 EXT1Q16394 746 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 GDPGP1Q6ZNW5 385 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 ENTHD1Q8IYW4 607 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 GAB3Q8WWW8 586 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 KATNB1Q9BVA0 655 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 TP63Q9H3D4 680 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 KCND3Q9UK17 655 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 TOXO94900 526 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 EML2O95834 649 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 CSTBP04080 98 aaKnown RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 FCRL6Q6DN72 434 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 TCTN3Q6NUS6 607 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 SPRYD4Q8WW59 207 aaPredicted RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 RBM24Q9BX46 236 aaKnown RBP12.82□□□□□ -0.36
CIITA-213ENST00000618327 SMURF1Q9HCE7 757 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 PCDHGB2Q9Y5G2 931 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 NPFFR2Q9Y5X5 522 aa12.82□□□□□ -0.36
CIITA-213ENST00000618327 WDR81Q562E7 1941 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 A0A1W2PPC1 479 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 AGAP5A6NIR3 686 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 ZNF701M0R085 212 aaPredicted RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 MEN1O00255 615 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 S100A10P60903 97 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 FAM189A2Q15884 450 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 GUSBP11Q6P575 273 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 C5orf46Q6UWT4 87 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PM20D2Q8IYS1 436 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 ABCG5Q9H222 651 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PCOLCE2Q9UKZ9 415 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 CCL27Q9Y4X3 112 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 BRWD1Q9NSI6 2320 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 TMED7-TICAM2A0A0A6YYA0 188 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 TVP23AA6NH52 213 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 SMAD9O15198 467 aaKnown RBP12.81□□□□□ -0.36
CIITA-213ENST00000618327 ZNF208O43345 1280 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 SLC16A7O60669 478 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 PRAMEF4O60810 478 aa12.81□□□□□ -0.36
CIITA-213ENST00000618327 IGHV4-34P06331 123 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms