RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 WISP2O76076 250 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 CST1P01037 141 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF708P17019 499 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 BMP7P18075 431 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 RRM2P31350 389 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 YAP1P46937 504 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 CLDN18P56856 261 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 EGR4Q05215 589 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ELOA3BQ3SY89 546 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 SYT14P1Q58G82 188 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 WDR88Q6ZMY6 472 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ESPNLQ6ZVH7 1005 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 CHERPQ8IWX8 916 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 LILRA2Q8N149 483 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ELOA3Q8NG57 546 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 OR4C15Q8NGM1 316 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 PYDC1Q8WXC3 89 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 STMN2Q93045 179 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 RELTQ969Z4 430 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 SARAFQ96BY9 339 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 DDIT4LQ96D03 193 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 CENPNQ96H22 339 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ADGRG7Q96K78 797 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 PSD2Q9BQI7 771 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 BDH2Q9BUT1 245 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 LDAHQ9H6V9 325 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 PAQR5Q9NXK6 330 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 TRAPPC4Q9Y296 219 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ALPK2Q86TB3 2170 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 SPG11Q96JI7 2443 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 A0A087WUU8 490 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 TMEM72A0PK05 275 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 SHISA8B8ZZ34 492 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 BCKDKO14874 412 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 OR2T1O43869 369 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 TIPRLO75663 272 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 DIRAS1O95057 198 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 GADD45GO95257 159 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 MT-ND1P03886 318 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 IL11P20809 199 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 DNAJA1P31689 397 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 ERFP50548 548 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 CTBP2P56545 445 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 PER3P56645 1201 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 SPIBQ01892 262 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 RIPK1Q13546 671 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 MFSD13AQ14CX5 517 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 CTU2Q2VPK5 515 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 DCST1Q5T197 706 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 TTC33Q6PID6 262 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 MBOAT2Q6ZWT7 520 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 GGNQ86UU5 652 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 NKAIN4Q8IVV8 208 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 PM20D2Q8IYS1 436 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 TMEM239Q8WW34 195 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 LIPHQ8WWY8 451 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 WDYHV1Q96HA8 205 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 LURAP1Q96LR2 239 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 KLHL15Q96M94 604 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 UCN2Q96RP3 112 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 TIMP4Q99727 224 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 OSBPL10Q9BXB5 764 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 KLHL4Q9C0H6 718 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 REEP1Q9H902 201 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 NTN4Q9HB63 628 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 SPRR3Q9UBC9 169 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF835Q9Y2P0 537 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC6A5Q9Y345 797 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 TESMINQ9Y4I5 508 aa10.46□□□□□ -0.73
CHMP2A-207ENST00000600804 HRNRQ86YZ3 2850 aaPredicted RBP10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 NAV3Q8IVL0 2385 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 DOCK7Q96N67 2140 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 TRAV36DV7A0A075B6V5 113 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 TRBV4-1A0A0J9YWV2 114 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 SH3PXD2BA1X283 911 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 TNFRSF11BO00300 401 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 PMS2P2O95744 297 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 MT-ATP6P00846 226 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 HOXD4P09016 255 aaPredicted RBP10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 FPR1P21462 350 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 PTGER4P35408 488 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 CLDN15P56746 228 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 KRTAP10-9P60411 292 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 PRKCDQ05655 676 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 SF3B4Q15427 424 aaKnown RBP eCLIP10.45□□□□□ -0.749e-6■□□□□ 11.2
CHMP2A-207ENST00000600804 CDSNQ15517 529 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 ZNF239Q16600 458 aaKnown RBP10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 PDSS1Q5T2R2 415 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 FAM69AQ5T7M9 428 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 C1orf140Q5VVS0 124 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 PODNL1Q6PEZ8 512 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 SHQ1Q6PI26 577 aaKnown RBP10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 Q6ZPB1 254 aaPredicted RBP10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 TMPPEQ6ZT21 453 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 ZNF295-AS1Q8N0V1 137 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 PQLC1Q8N2U9 271 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 OR5M1Q8NGP8 315 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 MFSD8Q8NHS3 518 aa10.45□□□□□ -0.74
CHMP2A-207ENST00000600804 ZPLD1Q8TCW7 415 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms