RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MAL2Q969L2 176 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 NSRP1Q9H0G5 558 aaKnown RBP16.56■□□□□ 0.24
PNKP-213ENST00000599543 EXOSC3Q9NQT5 275 aaKnown RBP16.56■□□□□ 0.24
PNKP-213ENST00000599543 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.56■□□□□ 0.24
PNKP-213ENST00000599543 SONP18583 2426 aaKnown RBP16.55■□□□□ 0.24
PNKP-213ENST00000599543 TRBV5-3A0A0A0MS03 114 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 CLDN24A6NM45 220 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 PMS2P2O95744 297 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 BCHEP06276 602 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 COX5AP20674 150 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 IGHV1-2P23083 117 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 EDNRAP25101 427 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 ANXA11P50995 505 aaKnown RBP16.55■□□□□ 0.24
PNKP-213ENST00000599543 KCNJ10P78508 379 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 PDK3Q15120 406 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 RGNQ15493 299 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 ETFDHQ16134 617 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 TIMM23BQ5SRD1 257 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 UBE2J2Q8N2K1 259 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 PIGXQ8TBF5 258 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 NEUROG1Q92886 237 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 DNAJA3Q96EY1 480 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 CPPED1Q9BRF8 314 aaPredicted RBP16.55■□□□□ 0.24
PNKP-213ENST00000599543 SLC38A1Q9H2H9 487 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 TMEM45AQ9NWC5 275 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 FAM53CQ9NYF3 392 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 LIPT1Q9Y234 373 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 NOSIPQ9Y314 301 aaKnown RBP16.55■□□□□ 0.24
PNKP-213ENST00000599543 HDGFL3Q9Y3E1 203 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 MAGED1Q9Y5V3 778 aaPredicted RBP16.55■□□□□ 0.24
PNKP-213ENST00000599543 CAPN7Q9Y6W3 813 aa16.55■□□□□ 0.24
PNKP-213ENST00000599543 IGKV3D-15A0A087WSY6 115 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 DPRXA6NFQ7 191 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 OVOL3O00110 214 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 DNPH1O43598 174 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 SNX3O60493 162 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 DANCRP0C864 163 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 HTR3AP46098 478 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 MTPNP58546 118 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 VEZF1Q14119 521 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 CLEC12BQ2HXU8 276 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 AP1ARQ63HQ0 302 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 REP15Q6BDI9 236 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 P2RY8Q86VZ1 359 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 CMIPQ8IY22 773 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 APH1AQ96BI3 265 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 ARL5BQ96KC2 179 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 TRNT1Q96Q11 434 aaKnown RBP16.54■□□□□ 0.24
PNKP-213ENST00000599543 TRIM2Q9C040 744 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 OR11A1Q9GZK7 315 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 ALG2Q9H553 416 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 FAIMQ9NVQ4 179 aa16.54■□□□□ 0.24
PNKP-213ENST00000599543 ZNF716A6NP11 495 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 GPR171O14626 319 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 MRASO14807 208 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 RAD51DO75771 328 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 IGHV3-9P01782 118 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 CDKN1AP38936 164 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 IDH2P48735 452 aaKnown RBP16.53■□□□□ 0.24
PNKP-213ENST00000599543 CLK1P49759 484 aaKnown RBP16.53■□□□□ 0.24
PNKP-213ENST00000599543 TXNL4AP83876 142 aaKnown RBP16.53■□□□□ 0.24
PNKP-213ENST00000599543 FAPQ12884 760 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 TNK1Q13470 666 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 GNA13Q14344 377 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 RUNDC3AQ59EK9 446 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 FBXW9Q5XUX1 488 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 TREML1Q86YW5 311 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 ZNF433Q8N7K0 673 aaPredicted RBP16.53■□□□□ 0.24
PNKP-213ENST00000599543 SLC38A5Q8WUX1 472 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 TMEM19Q96HH6 336 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 P2RX2Q9UBL9 471 aa16.53■□□□□ 0.24
PNKP-213ENST00000599543 HEATR1Q9H583 2144 aaKnown RBP16.52■□□□□ 0.24
PNKP-213ENST00000599543 CIB4A0PJX0 185 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 AGAP5A6NIR3 686 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 OR5H1A6NKK0 313 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 CCT8L1PA6NM43 557 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 INAFM1C9JVW0 142 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 ABCD4O14678 606 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 UQCRBP14927 111 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 CCNA2P20248 432 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 IDUAP35475 653 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 MAGEA8P43361 318 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 CDH11P55287 796 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 OR2B6P58173 313 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 PLAURQ03405 335 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 PGGHGQ32M88 737 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 MMEL1Q495T6 779 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 ADGRG3Q86Y34 549 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 DPP10Q8N608 796 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 NFKBIDQ8NI38 313 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 WDR60Q8WVS4 1066 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 CNOT9Q92600 299 aaKnown RBP16.52■□□□□ 0.24
PNKP-213ENST00000599543 DDIT4LQ96D03 193 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 RCN3Q96D15 328 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 CGREF1Q99674 301 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 PIF1Q9H611 641 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 ASB6Q9NWX5 421 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 CISD1Q9NZ45 108 aaKnown RBP16.52■□□□□ 0.24
PNKP-213ENST00000599543 NPAP1Q9NZP6 1156 aa16.52■□□□□ 0.24
PNKP-213ENST00000599543 TMEM181Q9P2C4 612 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms