RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 OR13C2Q8NGS9 318 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 FBLIM1Q8WUP2 373 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 DTNBP1Q96EV8 351 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 MUS81Q96NY9 551 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 UBL7Q96S82 380 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 OR11A1Q9GZK7 315 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 EGLN3Q9H6Z9 239 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF703Q9H7S9 590 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 MCCC2Q9HCC0 563 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 KLHL1Q9NR64 748 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
SHKBP1-211ENST00000595945 A0A087WV48 116 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 C1QTNF9BB2RNN3 333 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 FTCDNL1E5RQL4 147 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 HCN1O60741 890 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 HPNP05981 417 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 ASAH2BP0C7U1 165 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 C1QTNF9P0C862 333 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 CLK1P49759 484 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 SELENBP1Q13228 472 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 PDK3Q15120 406 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 TBR1Q16650 682 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 RPL13AP3Q6NVV1 102 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 OR5M1Q8NGP8 315 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 SLC25A43Q8WUT9 341 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 OSTF1Q92882 214 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 CNBD2Q96M20 576 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 MOGAT1Q96PD6 335 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 TNFRSF13CQ96RJ3 184 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 FKRPQ9H9S5 495 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 SERINC1Q9NRX5 453 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF337Q9Y3M9 751 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 PCDHGB7Q9Y5F8 929 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 PCDHGB5Q9Y5G0 923 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 GMPPBQ9Y5P6 360 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 SPIN1Q9Y657 262 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 HSPE1-MOB4S4R3N1 261 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 ACACBO00763 2458 aa13.3□□□□□ -0.28
SHKBP1-211ENST00000595945 TRAV27A0A087WT01 109 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 TRAV17A0A0B4J275 112 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 MED19A0JLT2 244 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 RCBTB2O95199 551 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 AHSA1O95433 338 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 MT-ATP6P00846 226 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 SAGP10523 405 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 TCEA1P23193 301 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 FKBP2P26885 142 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 POU1F1P28069 291 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 RPS5P46782 204 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 GIPRP48546 466 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 CD97P48960 835 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 NUP107P57740 925 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 ISL1P61371 349 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 GINS1Q14691 196 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 ANKDD1AQ495B1 522 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 ZBED5Q49AG3 693 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 FAM69AQ5T7M9 428 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 BORAQ6PGQ7 559 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 UNQ6494/PRO21346Q6UXR6 183 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 OAFQ86UD1 273 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 SLC43A2Q8N370 569 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 LRRC17Q8N6Y2 441 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 SETD9Q8NE22 299 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 FAM83FQ8NEG4 500 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 OR4Q3Q8NH05 313 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 MFSD8Q8NHS3 518 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 TEX47Q8TBZ9 253 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 FANK1Q8TC84 345 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 SLC39A7Q92504 469 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 ARL5BQ96KC2 179 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 SAMD8Q96LT4 415 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 PIGQQ9BRB3 760 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 ENKD1Q9H0I2 346 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 QPCTLQ9NXS2 382 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 B4GALT7Q9UBV7 327 aa13.29□□□□□ -0.28
SHKBP1-211ENST00000595945 PRRC2CQ9Y520 2896 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 ASPMQ8IZT6 3477 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 H3BN98 237 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 OR2T1O43869 369 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 PDGFAP04085 211 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 IMPDH2P12268 514 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 GABRB1P18505 474 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 GDF1P27539 372 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 UQCRC1P31930 480 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 CD47Q08722 323 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 SYT14P1Q58G82 188 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 RAET1LQ5VY80 246 aa13.28□□□□□ -0.28
SHKBP1-211ENST00000595945 TMEM236Q5W0B7 351 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms