RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 HOXD4P09016 255 aaPredicted RBP20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 HOXB6P17509 224 aaKnown RBP20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 RBM34P42696 430 aaKnown RBP20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 RPS5P46782 204 aaKnown RBP20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 SGCBQ16585 318 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 PDSS1Q5T2R2 415 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 C5orf46Q6UWT4 87 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 SEM1Q6ZVN7 128 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 TMEM239Q8WW34 195 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 HS6ST2Q96MM7 605 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 TRIB1Q96RU8 372 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 FUZQ9BT04 418 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 SLC19A3Q9BZV2 496 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 CLCF1Q9UBD9 225 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 A0A087WUU8 490 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 LIPT2A6NK58 231 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 FTCDNL1E5RQL4 147 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 PYCARD-AS1I3L0S3 204 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 FKBP6O75344 327 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 RRM2P31350 389 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 IDUAP35475 653 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 UGT2B15P54855 530 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 C1orf185Q5T7R7 199 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 NSUN5P2Q63ZY6 315 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 CHMP1BQ7LBR1 199 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 CALHM2Q9HA72 323 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 TRAV36DV7A0A075B6V5 113 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 TRBV4-1A0A0J9YWV2 114 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 CD8B2A6NJW9 211 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 TGM6O95932 706 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 PLA2G2AP14555 144 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 CASP6P55212 293 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 SPIBQ01892 262 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 PON3Q15166 354 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 SF3B4Q15427 424 aaKnown RBP eCLIP20.19■□□□□ 0.823e-15■■■■□ 26.2
SNRNP70-204ENST00000595231 ARHGAP21Q5T5U3 1957 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 OR52J3Q8NH60 311 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 MFSD8Q8NHS3 518 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 FNDC9Q8TBE3 224 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 ACOT11Q8WXI4 607 aaPredicted RBP20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 CPNE4Q96A23 557 aaPredicted RBP20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 TTYH2Q9BSA4 534 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 TIGARQ9NQ88 270 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 ARMC1Q9NVT9 282 aa20.19■□□□□ 0.82
SNRNP70-204ENST00000595231 PHF3Q92576 2039 aaKnown RBP20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 E9PLN8 166 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 FZD7O75084 574 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 GADD45GO95257 159 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 AHSA1O95433 338 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 KLK2P20151 261 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 FPR1P21462 350 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 ENPP1P22413 925 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 HMGA2P52926 109 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 CSNK2A1P68400 391 aaPredicted RBP20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 H3F3AP84243 136 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 LTBQ06643 244 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 ZNF239Q16600 458 aaKnown RBP20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 FAM69AQ5T7M9 428 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 OR2T5Q6IEZ7 315 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 PODNL1Q6PEZ8 512 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 TBPL2Q6SJ96 375 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 B3GNT6Q6ZMB0 384 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 MARVELD2Q8N4S9 558 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 OR2T29Q8NH02 315 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 PFN4Q8NHR9 129 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 DMRTA2Q96SC8 542 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 EPYCQ99645 322 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 VKORC1Q9BQB6 163 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 MEMO1Q9Y316 297 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 HIVEP3Q5T1R4 2406 aa20.18■□□□□ 0.82
SNRNP70-204ENST00000595231 MYO7BQ6PIF6 2116 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 LRRN3E7EW58 273 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 KPNA4O00629 521 aaPredicted RBP20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 OR2T1O43869 369 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 LIMS1P48059 325 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 AGFG1P52594 562 aaKnown RBP20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 OR2B6P58173 313 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 SMIM11AP58511 58 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 SEC23BQ15437 767 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 OR7A5Q15622 319 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 OR6S1Q8NH40 331 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 ROBO4Q8WZ75 1007 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 MOGAT1Q96PD6 335 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 C20orf141Q9NUB4 165 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 VNN3Q9NY84 501 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 ZNF175Q9Y473 711 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 AP4S1Q9Y587 144 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 LYVE1Q9Y5Y7 322 aa20.17■□□□□ 0.82
SNRNP70-204ENST00000595231 MBD3L4A6NDZ8 208 aaPredicted RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MBD3L3A6NE82 208 aaPredicted RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MBD3L5A6NJ08 208 aaPredicted RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 SLC22A20A6NK97 555 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 DNPH1O43598 174 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 KRT36O76013 467 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 AQP8O94778 261 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 TOXO94900 526 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 CST1P01037 141 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 IGF2P01344 180 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 BGLAPP02818 100 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 GLI4P10075 376 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms