RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 BBS1Q8NFJ9 593 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 OR52I1Q8NGK6 324 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 TAAR8Q969N4 342 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 LGALS12Q96DT0 336 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 TAPBPLQ9BX59 468 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 ERGIC3Q9Y282 383 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 PCDHGB6Q9Y5F9 930 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 PRR23D1E9PI22 279 aaPredicted RBP18.02■□□□□ 0.47
TRIM47-204ENST00000587339 RAB36O95755 333 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 ASAH2BP0C7U1 165 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 PRR23D2P0DMB1 279 aaPredicted RBP18.02■□□□□ 0.47
TRIM47-204ENST00000587339 PRKCAP17252 672 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 HK1P19367 917 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 HTR1FP30939 366 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 TIGD6Q17RP2 521 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 ZNF362Q5T0B9 420 aaPredicted RBP18.02■□□□□ 0.47
TRIM47-204ENST00000587339 DPY19L2P2Q6ZN68 376 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 GID4Q8IVV7 300 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 ALDH16A1Q8IZ83 802 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 ARMC10Q8N2F6 343 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 TMEM156Q8N614 296 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 B3GNT4Q9C0J1 378 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 CHRNA9Q9UGM1 479 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 DIMT1Q9UNQ2 313 aaKnown RBP18.02■□□□□ 0.47
TRIM47-204ENST00000587339 HIF3AQ9Y2N7 669 aa18.02■□□□□ 0.47
TRIM47-204ENST00000587339 KNTC1P50748 2209 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 TRAV36DV7A0A075B6V5 113 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 ZC3H12DA2A288 527 aaKnown RBP18.01■□□□□ 0.47
TRIM47-204ENST00000587339 IFNGP01579 166 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 PCSK6P29122 969 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 MLF1P58340 268 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 LTBQ06643 244 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 SNTA1Q13424 505 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 MED22Q15528 200 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 ANKRD13BQ86YJ7 626 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 DND1Q8IYX4 353 aaKnown RBP18.01■□□□□ 0.47
TRIM47-204ENST00000587339 FAM117AQ9C073 453 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 FKRPQ9H9S5 495 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 ZNF229Q9UJW7 825 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 VDAC3Q9Y277 283 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 IER3IP1Q9Y5U9 82 aa18.01■□□□□ 0.47
TRIM47-204ENST00000587339 IGLV3-32A0A0A0MS00 114 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 A8MVM7 634 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 TERTO14746 1132 aaKnown RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 APOL3O95236 402 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 HIST1H2ABP04908 130 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 Q0VFX4 171 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ANKDD1AQ495B1 522 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 RNLSQ5VYX0 342 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ARSKQ6UWY0 536 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 HIST3H2AQ7L7L0 130 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ZNF367Q7RTV3 350 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 HIST1H2ACQ93077 130 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 YIPF6Q96EC8 236 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 SECISBP2Q96T21 854 aaKnown RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 MED20Q9H944 212 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 CPNE5Q9HCH3 593 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 NRIP3Q9NQ35 241 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 CLEC2DQ9UHP7 191 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ENPP5Q9UJA9 477 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ADAM18Q9Y3Q7 739 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 TNFSF12-TNFSF13A0A0A6YY99 330 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 LOC101059948A0A1B0GTJ6 334 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 TMEM72A0PK05 275 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 PAICSP22234 425 aaKnown RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 AQP2P41181 271 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ZNF41P51814 821 aaPredicted RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 CHAF1BQ13112 559 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ITGADQ13349 1161 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 IL10RAQ13651 578 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 CRMP1Q14194 572 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 PRAMEF20Q5VT98 475 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 C1QL3Q5VWW1 255 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 NIPAL3Q6P499 406 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 NANOGNBQ7Z5D8 188 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 P2RY8Q86VZ1 359 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 TMPRSS12Q86WS5 348 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 ERI1Q8IV48 349 aaKnown RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 SLC37A3Q8NCC5 494 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 MOSPD2Q8NHP6 518 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 PTP4A1Q93096 173 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 OR5M11Q96RB7 305 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 GPX7Q96SL4 187 aaPredicted RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 MND1Q9BWT6 205 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 HCAR1Q9BXC0 346 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 FGF20Q9NP95 211 aaPredicted RBP18■□□□□ 0.47
TRIM47-204ENST00000587339 HRH3Q9Y5N1 445 aa18■□□□□ 0.47
TRIM47-204ENST00000587339 M0R082 166 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 M0R3G1 203 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 NPIPB7O75200 414 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 ATE1O95260 518 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 SERPINA7P05543 415 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 HSMCR30P0CW71 290 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 HIST1H1CP16403 213 aaKnown RBP17.99■□□□□ 0.47
TRIM47-204ENST00000587339 MYL12AP19105 171 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 ATP6V1E1P36543 226 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 APOBEC1P41238 236 aaKnown RBP17.99■□□□□ 0.47
TRIM47-204ENST00000587339 GABREP78334 506 aa17.99■□□□□ 0.47
TRIM47-204ENST00000587339 INPP5JQ15735 1006 aaPredicted RBP17.99■□□□□ 0.47
TRIM47-204ENST00000587339 ALG10Q5BKT4 473 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms