RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 C6orf47O95873 294 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 IGHV3-9P01782 118 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 SRD5A1P18405 259 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 IGFBP5P24593 272 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 GZMKP49863 264 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 EFNA4P52798 201 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 NME5P56597 212 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 CSNK2A1P68400 391 aaPredicted RBP11.91□□□□□ -0.5
SS18-222ENST00000582792 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
SS18-222ENST00000582792 SKP2Q13309 424 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 PDZK1Q5T2W1 519 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 BHLHB9Q6PI77 547 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 TMPPEQ6ZT21 453 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 SPATA21Q7Z572 469 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 MTDHQ86UE4 582 aaKnown RBP11.91□□□□□ -0.5
SS18-222ENST00000582792 APH1AQ96BI3 265 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
SS18-222ENST00000582792 LAT2Q9GZY6 243 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 RMND5AQ9H871 391 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 SERINC1Q9NRX5 453 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 ASB6Q9NWX5 421 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 TAS2R16Q9NYV7 291 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 MALT1Q9UDY8 824 aa11.91□□□□□ -0.5
SS18-222ENST00000582792 NOSIPQ9Y314 301 aaKnown RBP11.91□□□□□ -0.5
SS18-222ENST00000582792 A0A1W2PR80 420 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SULT2B1O00204 365 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SNX3O60493 162 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SHOX2O60902 331 aaPredicted RBP11.9□□□□□ -0.5
SS18-222ENST00000582792 BMP4P12644 408 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 NCF2P19878 526 aaPredicted RBP11.9□□□□□ -0.5
SS18-222ENST00000582792 UQCRC2P22695 453 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 MAGEA8P43361 318 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SEC24CP53992 1094 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SESN3P58005 492 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 HBA1P69905 142 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 TXNL4AP83876 142 aaKnown RBP11.9□□□□□ -0.5
SS18-222ENST00000582792 SRSF2Q01130 221 aaKnown RBP11.9□□□□□ -0.5
SS18-222ENST00000582792 CHRNB3Q05901 458 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 GABRA6Q16445 453 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SPDYE7PQ495Y7 208 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SYT14P1Q58G82 188 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 OR7E24Q6IFN5 339 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 FAM166AQ6J272 317 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 BLOC1S3Q6QNY0 202 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 CPLX4Q7Z7G2 160 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 FUNDC1Q8IVP5 155 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SLC25A43Q8WUT9 341 aaPredicted RBP11.9□□□□□ -0.5
SS18-222ENST00000582792 MUS81Q96NY9 551 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 OR7D2Q96RA2 312 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 OR52E6Q96RD3 313 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SDF2Q99470 211 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 ELAC2Q9BQ52 826 aaKnown RBP11.9□□□□□ -0.5
SS18-222ENST00000582792 NMUR2Q9GZQ4 415 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 PMF1-BGLAPU3KQ54 211 aa11.9□□□□□ -0.5
SS18-222ENST00000582792 SLC35F4A4IF30 521 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 VWC2LB2RUY7 222 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 GPR171O14626 319 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 CCDC22O60826 627 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 CYP7B1O75881 506 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 LY6HO94772 140 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 ZCCHC18P0CG32 403 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 PGCP20142 388 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 APOBEC3AP31941 199 aaPredicted RBP11.89□□□□□ -0.51
SS18-222ENST00000582792 NTF4P34130 210 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 FOXG1P55316 489 aaPredicted RBP11.89□□□□□ -0.51
SS18-222ENST00000582792 MERTKQ12866 999 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 ZNF141Q15928 474 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 AGKQ53H12 422 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 IL17RELQ6ZVW7 336 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 PIGWQ7Z7B1 504 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 TRIML2Q8N7C3 387 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 OR5D16Q8NGK9 328 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 OR4A15Q8NGL6 344 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 OR9I1Q8NGQ6 314 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 PIGXQ8TBF5 258 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 ZHX1-C8orf76Q96EF9 292 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 ITCHQ96J02 903 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 C1QTNF6Q9BXI9 259 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 CHODLQ9H9P2 273 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 FKRPQ9H9S5 495 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 SLC52A3Q9NQ40 469 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 SAR1AQ9NR31 198 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 KCNE5Q9UJ90 142 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 ATP23Q9Y6H3 246 aa11.89□□□□□ -0.51
SS18-222ENST00000582792 CENPVL1A0A0U1RR11 272 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 CCDC154A6NI56 674 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 NDUFS8O00217 210 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
SS18-222ENST00000582792 PMS2P2O95744 297 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 ITGA5P08648 1049 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 TFPIP10646 304 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 SLC16A1P53985 500 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 GGTLC2Q14390 218 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 GPR68Q15743 365 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 FAM120AOSQ5T036 256 aa11.88□□□□□ -0.51
SS18-222ENST00000582792 CLECL1Q8IZS7 167 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms