RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 APCDD1LQ8NCL9 501 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 PSD4Q8NDX1 1056 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 BBS1Q8NFJ9 593 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 OR9Q1Q8NGQ5 310 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 OR8K3Q8NH51 312 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 LIPHQ8WWY8 451 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 NKD1Q969G9 470 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 DACH2Q96NX9 599 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 TBL1XR1Q9BZK7 514 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 ADAM19Q9H013 955 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 C19orf25Q9UFG5 118 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-208ENST00000571043 NXT1Q9UKK6 140 aaKnown RBP15.79■□□□□ 0.12
RPAIN-208ENST00000571043 ZNF337Q9Y3M9 751 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 ACACAQ13085 2346 aa15.79■□□□□ 0.12
RPAIN-208ENST00000571043 PRR23D1E9PI22 279 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 SOCS6O14544 535 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 GNB5O14775 395 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 NDUFB5O43674 189 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 FADS1O60427 444 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 PRR23D2P0DMB1 279 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ZNF117Q03924 483 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 SLC35F1Q5T1Q4 408 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 PAPD4Q6PIY7 484 aaKnown RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 CPEB2Q7Z5Q1 589 aaKnown RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 CT55Q8WUE5 264 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 LPAR4Q99677 370 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 SEC14L4Q9UDX3 406 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 SLC22A31A6NKX4 558 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 TERTO14746 1132 aaKnown RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 PPP1R3DO95685 299 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ADRB1P08588 477 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 LIMS3P0CW19 117 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 LIMS4P0CW20 117 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ZNF3P17036 446 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 FOXL2P58012 376 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ITGADQ13349 1161 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ZNF362Q5T0B9 420 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 DESI1Q6ICB0 168 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 DPY19L2P2Q6ZN68 376 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 MARCH3Q86UD3 253 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 MISPQ8IVT2 679 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 OR5L2Q8NGL0 311 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 OR5W2Q8NH69 310 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ZNF563Q8TA94 476 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 BORCS5Q969J3 196 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 WDR77Q9BQA1 342 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 CHCHD6Q9BRQ6 235 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 CRB3Q9BUF7 120 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 GPR87Q9BY21 358 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 ZBTB20Q9HC78 741 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 NDUFB11Q9NX14 153 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 TNFRSF10DQ9UBN6 386 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 CHRNA9Q9UGM1 479 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 KLHL21Q9UJP4 597 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 FARSAQ9Y285 508 aaKnown RBP15.78■□□□□ 0.12
RPAIN-208ENST00000571043 NPFFR2Q9Y5X5 522 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 A3GALT2U3KPV4 340 aa15.78■□□□□ 0.12
RPAIN-208ENST00000571043 LOC100506127A0A0U1RQW1 187 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 FAM183AA6NL82 134 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 C21orf140B9A014 251 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 J3QRE1 110 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 HCRTR2O43614 444 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 APOL3O95236 402 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 CPEP16870 476 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 NAGAP17050 411 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 PGCP20142 388 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 PAICSP22234 425 aaKnown RBP15.77■□□□□ 0.11
RPAIN-208ENST00000571043 PSMA1P25786 263 aaKnown RBP15.77■□□□□ 0.11
RPAIN-208ENST00000571043 MST1P26927 711 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 EVI2BP34910 448 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 BMXP51813 675 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 PRPS1P60891 318 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 RPS4XP62701 263 aaKnown RBP15.77■□□□□ 0.11
RPAIN-208ENST00000571043 TBC1D25Q3MII6 688 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 ANKDD1AQ495B1 522 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 SLC37A3Q8NCC5 494 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 OR52N1Q8NH53 320 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 PTP4A1Q93096 173 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 GPX7Q96SL4 187 aaPredicted RBP15.77■□□□□ 0.11
RPAIN-208ENST00000571043 RTN4RQ9BZR6 473 aa15.77■□□□□ 0.11
RPAIN-208ENST00000571043 SLIRPQ9GZT3 109 aaKnown RBP15.77■□□□□ 0.11
RPAIN-208ENST00000571043 CCDC59Q9P031 241 aaKnown RBP15.77■□□□□ 0.11
RPAIN-208ENST00000571043 LOC101059948A0A1B0GTJ6 334 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 ARPC3O15145 178 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 IDH3BO43837 385 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 CDC40O60508 579 aaKnown RBP eCLIP15.76■□□□□ 0.11
RPAIN-208ENST00000571043 LIPCP11150 499 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 NOS3P29474 1203 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 ATP6V1E1P36543 226 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 TGFBR1P36897 503 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 SOX3P41225 446 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 SLC26A5P58743 744 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 RPS15P62841 145 aaKnown RBP15.76■□□□□ 0.11
RPAIN-208ENST00000571043 ACSM1Q08AH1 577 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 DNASE1L3Q13609 305 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 TPBGQ13641 420 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 CBFBQ13951 182 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 ZNF74Q16587 644 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 SHFQ7M4L6 423 aa15.76■□□□□ 0.11
RPAIN-208ENST00000571043 PHC2Q8IXK0 858 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms