RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 CROCCP2Q86T23 111 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 PEX5LQ8IYB4 626 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 ZNF440Q8IYI8 595 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 MUC15Q8N387 334 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 MUS81Q96NY9 551 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 CACNG6Q9BXT2 260 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 SLC38A1Q9H2H9 487 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 AIG1Q9NVV5 245 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBR1-206ENST00000566493 OSGIN1Q9UJX0 560 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 ADAM21Q9UKJ8 722 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
UBR1-206ENST00000566493 ZANQ9Y493 2812 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 CSPG4Q6UVK1 2322 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 CR1P17927 2039 aa10.5□□□□□ -0.73
UBR1-206ENST00000566493 TMEM72A0PK05 275 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 TRPC5OSA6NMA1 111 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 FAAHO00519 579 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 GSNP06396 782 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 GPIP06744 558 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 CHRM4P08173 479 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 ALDOCP09972 364 aaKnown RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 CXCR1P25024 350 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 NTF4P34130 210 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 COPZ1P61923 177 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 IRX1P78414 480 aaPredicted RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 H3F3AP84243 136 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 BST1Q10588 318 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 GSTA3Q16772 222 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 MRPL2Q5T653 305 aaKnown RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 C9orf135Q5VTT2 229 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 KLHL24Q6TFL4 600 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 DNM1P46Q6ZS02 220 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 C17orf78Q8N4C9 275 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 GLB1L3Q8NCI6 653 aaPredicted RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 C1orf162Q8NEQ5 155 aaPredicted RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 OR52E4Q8NGH9 312 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 PNPT1Q8TCS8 783 aaKnown RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 TEX37Q96LM6 180 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 INPP5KQ9BT40 448 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 C1QTNF6Q9BXI9 259 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 FKRPQ9H9S5 495 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 CACYBPQ9HB71 228 aaKnown RBP10.49□□□□□ -0.73
UBR1-206ENST00000566493 CALML5Q9NZT1 146 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 DCTN4Q9UJW0 460 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 PRDM4Q9UKN5 801 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 FLVCR1Q9Y5Y0 555 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 ATP23Q9Y6H3 246 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 CADP27708 2225 aa10.49□□□□□ -0.73
UBR1-206ENST00000566493 FAM234BA2RU67 622 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SDHDO14521 159 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 RFXANKO14593 260 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 KRT33AO76009 404 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 ANP32DO95626 131 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 WNT11O96014 354 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 IFNA2P01563 188 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 C1QCP02747 245 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 ITGA5P08648 1049 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 IMPDH2P12268 514 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 RPS4Y1P22090 263 aaKnown RBP10.48□□□□□ -0.73
UBR1-206ENST00000566493 CDKN2CP42773 168 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 PLAURQ03405 335 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 CHRNB3Q05901 458 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SPOCK1Q08629 439 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 EPS8Q12929 822 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 CEACAM7Q14002 265 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 MPP2Q14168 576 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SLC17A1Q14916 467 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 OTUD3Q5T2D3 398 aaPredicted RBP10.48□□□□□ -0.73
UBR1-206ENST00000566493 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 NXNQ6DKJ4 435 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 HMBOX1Q6NT76 420 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 ZNF544Q6NX49 715 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 PAQR6Q6TCH4 344 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 CXXC5Q7LFL8 322 aaKnown RBP10.48□□□□□ -0.73
UBR1-206ENST00000566493 AAED1Q7RTV5 226 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 ABHD12BQ7Z5M8 362 aaPredicted RBP10.48□□□□□ -0.73
UBR1-206ENST00000566493 ANKRD42Q8N9B4 389 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SPATA3Q8NHX4 192 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SF3B5Q9BWJ5 86 aaKnown RBP10.48□□□□□ -0.73
UBR1-206ENST00000566493 TAPBPLQ9BX59 468 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 PARD6BQ9BYG5 372 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SLC17A5Q9NRA2 495 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 SLC7A10Q9NS82 523 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 P2RX2Q9UBL9 471 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 GPR45Q9Y5Y3 372 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 JMJD1CQ15652 2540 aa10.48□□□□□ -0.73
UBR1-206ENST00000566493 HEATR1Q9H583 2144 aaKnown RBP10.48□□□□□ -0.73
UBR1-206ENST00000566493 IGHV4-30-2A0A087WSY4 118 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 ZC3H12DA2A288 527 aaKnown RBP10.47□□□□□ -0.73
UBR1-206ENST00000566493 TMEM247A6NEH6 219 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 A8MV72 311 aaPredicted RBP10.47□□□□□ -0.73
UBR1-206ENST00000566493 SLCO1B7G3V0H7 640 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 PDLIM1O00151 329 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 HDAC3O15379 428 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 IL6P05231 212 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 KITP10721 976 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 IDO1P14902 403 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms