RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 UBQLNLQ8IYU4 475 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 ATP6V1C2Q8NEY4 427 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 OR5M9Q8NGP3 310 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 OR2V1Q8NHB1 315 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 ADGRG7Q96K78 797 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 HS6ST2Q96MM7 605 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 EPYCQ99645 322 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 TMEM43Q9BTV4 400 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 SLC19A3Q9BZV2 496 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 TMEM185BQ9H7F4 350 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 PNPLA3Q9NST1 481 aa23.28■■□□□ 1.32
NME3-208ENST00000565379 EIF1AYO14602 144 aaKnown RBP23.27■■□□□ 1.32
NME3-208ENST00000565379 SEC14L5O43304 696 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 NQO1P15559 274 aaKnown RBP23.27■■□□□ 1.32
NME3-208ENST00000565379 SFTPDP35247 375 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 RBM34P42696 430 aaKnown RBP23.27■■□□□ 1.32
NME3-208ENST00000565379 CLDN20P56880 219 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 CSNK2A1P68400 391 aaPredicted RBP23.27■■□□□ 1.32
NME3-208ENST00000565379 LINC00114Q6XXX2 140 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 ADGRG5Q8IZF4 528 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 SDCCAG3Q96C92 435 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 RSRC1Q96IZ7 334 aaKnown RBP23.27■■□□□ 1.32
NME3-208ENST00000565379 UCN2Q96RP3 112 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 PIP5K1AQ99755 562 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 TRAPPC4Q9Y296 219 aa23.27■■□□□ 1.32
NME3-208ENST00000565379 HTR3EA5X5Y0 456 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 hCG_2039718K7EN88 272 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 DNPH1O43598 174 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 NPIPB7O75200 414 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 CLDN14O95500 239 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 CCNA2P20248 432 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 SUCLG1P53597 346 aaKnown RBP23.26■■□□□ 1.31
NME3-208ENST00000565379 CARD18P57730 90 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 TRAM2Q15035 370 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 CTU2Q2VPK5 515 aaKnown RBP23.26■■□□□ 1.31
NME3-208ENST00000565379 IQCCQ4KMZ1 466 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 HBMQ6B0K9 141 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 ZNF585AQ6P3V2 769 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 TTC33Q6PID6 262 aaPredicted RBP23.26■■□□□ 1.31
NME3-208ENST00000565379 TMPPEQ6ZT21 453 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 OR6S1Q8NH40 331 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 CALHM2Q9HA72 323 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 AURKCQ9UQB9 309 aa23.26■■□□□ 1.31
NME3-208ENST00000565379 PDZD2O15018 2839 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 A0A0J9YW62 118 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 OR2T1O43869 369 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 LYPD3O95274 346 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 PMS2P2O95744 297 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 THY1P04216 161 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 AGAP20933 346 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 ACVR2AP27037 513 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 YAP1P46937 504 aaKnown RBP23.25■■□□□ 1.31
NME3-208ENST00000565379 CLDN15P56746 228 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 SGCBQ16585 318 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 TSEN54Q7Z6J9 526 aaKnown RBP23.25■■□□□ 1.31
NME3-208ENST00000565379 TSPYL5Q86VY4 417 aaPredicted RBP23.25■■□□□ 1.31
NME3-208ENST00000565379 PIK3C3Q8NEB9 887 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 OR10D3Q8NH80 312 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 CANT1Q8WVQ1 401 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 CPNE4Q96A23 557 aaPredicted RBP23.25■■□□□ 1.31
NME3-208ENST00000565379 OR5B2Q96R09 309 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 ZNF426Q9BUY5 554 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 CCM2LQ9NUG4 571 aaPredicted RBP23.25■■□□□ 1.31
NME3-208ENST00000565379 ALKBH4Q9NXW9 302 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 ZNF175Q9Y473 711 aa23.25■■□□□ 1.31
NME3-208ENST00000565379 A0A1W2PRQ8 180 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 TNFSF11O14788 317 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 FFAR1O14842 300 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 PRSS23O95084 383 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 AHSA1O95433 338 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 IGF2P01344 180 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 H1F0P07305 194 aaKnown RBP23.24■■□□□ 1.31
NME3-208ENST00000565379 EIF1AXP47813 144 aaKnown RBP23.24■■□□□ 1.31
NME3-208ENST00000565379 RAC3P60763 192 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 ACTR3P61158 418 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 MYBPHQ13203 477 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 DGCR6Q14129 220 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 C1orf185Q5T7R7 199 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 C1orf140Q5VVS0 124 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 ADGRE4PQ86SQ3 457 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 PAPD5Q8NDF8 572 aaKnown RBP23.24■■□□□ 1.31
NME3-208ENST00000565379 OSTF1Q92882 214 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 DUS3LQ96G46 650 aaKnown RBP23.24■■□□□ 1.31
NME3-208ENST00000565379 DHRS1Q96LJ7 313 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 TUBA1CQ9BQE3 449 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 NMNAT1Q9HAN9 279 aaPredicted RBP23.24■■□□□ 1.31
NME3-208ENST00000565379 MCTS1Q9ULC4 181 aaKnown RBP23.24■■□□□ 1.31
NME3-208ENST00000565379 CSMD2Q7Z408 3487 aa23.24■■□□□ 1.31
NME3-208ENST00000565379 TRAV36DV7A0A075B6V5 113 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 CD8B2A6NJW9 211 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 J3KTA2 159 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 SULT2B1O00204 365 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 KRT36O76013 467 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 OPN1LWP04000 364 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 SHC1P29353 583 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 IDUAP35475 653 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 MFSD13AQ14CX5 517 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 ACSF3Q4G176 576 aaPredicted RBP23.23■■□□□ 1.31
NME3-208ENST00000565379 NSUN5P2Q63ZY6 315 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 TMEM211Q6ICI0 200 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms