RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013		Q0VFX4	171 aa		21.35	■■□□□ 1.01
TM2D3-209	ENST00000560013	SNTA1	Q13424	505 aa		21.35	■■□□□ 1.01
TM2D3-209	ENST00000560013	CXXC5	Q7LFL8	322 aa	Known RBP	21.35	■■□□□ 1.01
TM2D3-209	ENST00000560013	TAAR8	Q969N4	342 aa		21.35	■■□□□ 1.01
TM2D3-209	ENST00000560013	CPNE5	Q9HCH3	593 aa		21.35	■■□□□ 1.01
TM2D3-209	ENST00000560013	PCSK5	Q92824	1860 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	ASAH2B	P0C7U1	165 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	ADORA3	P0DMS8	318 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	HK1	P19367	917 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	RPS5	P46782	204 aa	Known RBP	21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	MTNR1A	P48039	350 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	TMBIM6	P55061	237 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	LTB	Q06643	244 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	IL10RA	Q13651	578 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	ZNF362	Q5T0B9	420 aa	Predicted RBP	21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	ARHGAP11A	Q6P4F7	1023 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	TMEM81	Q6P7N7	255 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	DPY19L2P2	Q6ZN68	376 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	TMEM156	Q8N614	296 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	ERMAP	Q96PL5	475 aa	Predicted RBP	21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	SECISBP2	Q96T21	854 aa	Known RBP	21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	DOK1	Q99704	481 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	NAA50	Q9GZZ1	169 aa	Known RBP	21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	HIF3A	Q9Y2N7	669 aa		21.34	■■□□□ 1.01
TM2D3-209	ENST00000560013	TRAV36DV7	A0A075B6V5	113 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	IRGM	A1A4Y4	181 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	FAM183A	A6NL82	134 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	MCIDAS	D6RGH6	385 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	CSRP1	P21291	193 aa	Known RBP	21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	RPL4	P36578	427 aa	Known RBP	21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	RAB40B	Q12829	278 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	ANKDD1A	Q495B1	522 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	PLBD1	Q6P4A8	553 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	C12orf43	Q96C57	262 aa	Known RBP	21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	RNFT2	Q96EX2	444 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	FUNDC2	Q9BWH2	189 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	TAPBPL	Q9BX59	468 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	TAS2R16	Q9NYV7	291 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	CHRNA9	Q9UGM1	479 aa		21.33	■■□□□ 1.01
TM2D3-209	ENST00000560013	TMEM72	A0PK05	275 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	RIIAD1	A6NNX1	92 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013		A8MVM7	634 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	BLOC1S5-TXNDC5	H3BN57	136 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	PTH	P01270	115 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	SERPINA7	P05543	415 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	DLX5	P56178	289 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	GABRE	P78334	506 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	RNLS	Q5VYX0	342 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	H3F3C	Q6NXT2	135 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	ARSK	Q6UWY0	536 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	IGFN1	Q86VF2	1251 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	MARCH9	Q86YJ5	346 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	RAB43	Q86YS6	212 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	ERI1	Q8IV48	349 aa	Known RBP	21.32	■■□□□ 1
TM2D3-209	ENST00000560013	GID4	Q8IVV7	300 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	BBS1	Q8NFJ9	593 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	OR52I1	Q8NGK6	324 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	OTULIN	Q96BN8	352 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	LGALS12	Q96DT0	336 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	FKRP	Q9H9S5	495 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	ZNF229	Q9UJW7	825 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	DIMT1	Q9UNQ2	313 aa	Known RBP	21.32	■■□□□ 1
TM2D3-209	ENST00000560013	HRH3	Q9Y5N1	445 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	MRPS18B	Q9Y676	258 aa	Known RBP	21.32	■■□□□ 1
TM2D3-209	ENST00000560013	ZC3H12D	A2A288	527 aa	Known RBP	21.32	■■□□□ 1
TM2D3-209	ENST00000560013	NOL3	O60936	208 aa	Known RBP	21.32	■■□□□ 1
TM2D3-209	ENST00000560013	NPIPB7	O75200	414 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	RAB36	O95755	333 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	HTR1F	P30939	366 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	APOBEC1	P41238	236 aa	Known RBP	21.32	■■□□□ 1
TM2D3-209	ENST00000560013	GXYLT1	Q4G148	440 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	STK35	Q8TDR2	534 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	FRMD6	Q96NE9	622 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	NRIP3	Q9NQ35	241 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	VDAC3	Q9Y277	283 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	IER3IP1	Q9Y5U9	82 aa		21.32	■■□□□ 1
TM2D3-209	ENST00000560013	PRR23D1	E9PI22	279 aa	Predicted RBP	21.31	■■□□□ 1
TM2D3-209	ENST00000560013	IFNG	P01579	166 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	BGLAP	P02818	100 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	HIST1H2AB	P04908	130 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	PRR23D2	P0DMB1	279 aa	Predicted RBP	21.31	■■□□□ 1
TM2D3-209	ENST00000560013	ZNF3	P17036	446 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	ITGAD	Q13349	1161 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	C5orf46	Q6UWT4	87 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	HIST3H2A	Q7L7L0	130 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	MOSPD2	Q8NHP6	518 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	HIST1H2AC	Q93077	130 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	PTP4A1	Q93096	173 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	NKD1	Q969G9	470 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	GPX7	Q96SL4	187 aa	Predicted RBP	21.31	■■□□□ 1
TM2D3-209	ENST00000560013	FGF20	Q9NP95	211 aa	Predicted RBP	21.31	■■□□□ 1
TM2D3-209	ENST00000560013	HPF1	Q9NWY4	346 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013	ERGIC3	Q9Y282	383 aa		21.31	■■□□□ 1
TM2D3-209	ENST00000560013		H3BMQ9	156 aa		21.3	■■□□□ 1
TM2D3-209	ENST00000560013	ETV2	O00321	342 aa	Predicted RBP	21.3	■■□□□ 1
TM2D3-209	ENST00000560013	AQP2	P41181	271 aa		21.3	■■□□□ 1
TM2D3-209	ENST00000560013	ZNF41	P51814	821 aa	Predicted RBP	21.3	■■□□□ 1
TM2D3-209	ENST00000560013	INPP5J	Q15735	1006 aa	Predicted RBP	21.3	■■□□□ 1
TM2D3-209	ENST00000560013	PRAMEF20	Q5VT98	475 aa		21.3	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms