RNA–Protein interactions for RNA: ENST00000559603.1

RNF213-208, Transcript of ring finger protein 213, human

TSL 2

Gene RNF213, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF213-208	ENST00000559603	SPOCK1	Q08629	439 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	CEACAM7	Q14002	265 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	PPA1	Q15181	289 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	ZNF672	Q499Z4	452 aa	Predicted RBP	13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	LIN52	Q52LA3	116 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	RNF220	Q5VTB9	566 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	C9orf135	Q5VTT2	229 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	FBXW9	Q5XUX1	488 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	BLOC1S3	Q6QNY0	202 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	UBE2J2	Q8N2K1	259 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	LRRC8C	Q8TDW0	803 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	DDIT4L	Q96D03	193 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	COX4I2	Q96KJ9	171 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	TRIM2	Q9C040	744 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	VAPA	Q9P0L0	249 aa		13.98	□□□□□ -0.17
RNF213-208	ENST00000559603	TRBV5-3	A0A0A0MS03	114 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603		A0A0G2JPF8	293 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	OR5H1	A6NKK0	313 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	HNRNPCL2	B2RXH8	293 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	HNRNPCL3	B7ZW38	293 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	OVOL3	O00110	214 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	PDLIM1	O00151	329 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	NR5A2	O00482	541 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	ARHGEF9	O43307	516 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	DNPH1	O43598	174 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	HNRNPCL1	O60812	293 aa	Known RBP	13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	CD8A	P01732	235 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	CD3E	P07766	207 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	HNRNPCL4	P0DMR1	293 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	PTN	P21246	168 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	AQP5	P55064	265 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	SLC35A1	P78382	337 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	SLC25A3	Q00325	362 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	FAP	Q12884	760 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	PGGHG	Q32M88	737 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	LRIF1	Q5T3J3	769 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	PRSS57	Q6UWY2	283 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	BIVM	Q86UB2	503 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	WDR31	Q8NA23	367 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	OR52N5	Q8NH56	324 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	APH1A	Q96BI3	265 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	C3orf49	Q96BT1	292 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	ZHX1-C8orf76	Q96EF9	292 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	ZNF385A	Q96PM9	386 aa	Known RBP	13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	WFDC6	Q9BQY6	131 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	PRR14	Q9BWN1	585 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	SPATA9	Q9BWV2	254 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	A4GALT	Q9NPC4	353 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	SLC7A10	Q9NS82	523 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	CCDC167	Q9P0B6	97 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	EMC3	Q9P0I2	261 aa		13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.97	□□□□□ -0.17
RNF213-208	ENST00000559603	TMEM229A	B2RXF0	380 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	POLR3G	O15318	223 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	TPST1	O60507	370 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	TGDS	O95455	350 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	THBS1	P07996	1170 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	GGT1	P19440	569 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	FKBP2	P26885	142 aa	Known RBP	13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	LTB	Q06643	244 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	GNA13	Q14344	377 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	OR7A5	Q15622	319 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	GABRA6	Q16445	453 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	GLIPR1L2	Q4G1C9	344 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	ZNF311	Q5JNZ3	666 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	TIMM23B	Q5SRD1	257 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	TSPO2	Q5TGU0	170 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	WBP2NL	Q6ICG8	309 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	CASP12	Q6UXS9	341 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	ZNF440	Q8IYI8	595 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	NFKBID	Q8NI38	313 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	TMEM171	Q8WVE6	324 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	SPDL1	Q96EA4	605 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	CCDC28B	Q9BUN5	200 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	C1QTNF6	Q9BXI9	259 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	ESRP2	Q9H6T0	727 aa	Known RBP	13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	BCL2L10	Q9HD36	194 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	CALML5	Q9NZT1	146 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	SEC14L4	Q9UDX3	406 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	MALT1	Q9UDY8	824 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	SLC25A15	Q9Y619	301 aa		13.96	□□□□□ -0.17
RNF213-208	ENST00000559603	ARFGEF3	Q5TH69	2177 aa		13.96	□□□□□ -0.18
RNF213-208	ENST00000559603	GPR171	O14626	319 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	NPIPB7	O75200	414 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	NDUFS7	O75251	213 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	MRPL33	O75394	65 aa	Known RBP	13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	CNOT4	O95628	575 aa	Known RBP	13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	ARAF	P10398	606 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	CXCR1	P25024	350 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	HTR2A	P28223	471 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	IDUA	P35475	653 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	CDKN1A	P38936	164 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	ZNF83	P51522	516 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	EGR4	Q05215	589 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	ADRM1	Q16186	407 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	AGK	Q53H12	422 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	PAQR6	Q6TCH4	344 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	CLEC9A	Q6UXN8	241 aa		13.95	□□□□□ -0.18
RNF213-208	ENST00000559603	OR9K2	Q8NGE7	335 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms