RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 RNASET2O00584 256 aaKnown RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 GPR171O14626 319 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 POLR3GO15318 223 aaPredicted RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 ATP8B1O43520 1251 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 DNPH1O43598 174 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 LMX1BO60663 402 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 BCAS1O75363 584 aaPredicted RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 LY6HO94772 140 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 PMS2P2O95744 297 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 TFPIP10646 304 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 MATN1P21941 496 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 USF1P22415 310 aaPredicted RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 IGFBP5P24593 272 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 PGM1P36871 562 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 APOBEC1P41238 236 aaKnown RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHF-203ENST00000558294 GSTA3Q16772 222 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 PDCD4Q53EL6 469 aaKnown RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 BHLHB9Q6PI77 547 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 EIF3MQ7L2H7 374 aaKnown RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 C6orf120Q7Z4R8 191 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 CCDC103Q8IW40 242 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 ARFGAP2Q8N6H7 521 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 WDR31Q8NA23 367 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 OR52E4Q8NGH9 312 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 PIGXQ8TBF5 258 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 ZHX1-C8orf76Q96EF9 292 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 DNAJA3Q96EY1 480 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 ARL5BQ96KC2 179 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 OR52E6Q96RD3 313 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 C1QTNF6Q9BXI9 259 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 TCF7L2Q9NQB0 619 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 CTPS2Q9NRF8 586 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 CHRNA9Q9UGM1 479 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 HDGFL3Q9Y3E1 203 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 SPIN1Q9Y657 262 aaPredicted RBP9.36□□□□□ -0.91
SHF-203ENST00000558294 ATP23Q9Y6H3 246 aa9.36□□□□□ -0.91
SHF-203ENST00000558294 KIAA0513O60268 411 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 SCN2BO60939 215 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 MRPL33O75394 65 aaKnown RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 PGRP06401 933 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 BMP4P12644 408 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 APOBEC3AP31941 199 aaPredicted RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 CLK1P49759 484 aaKnown RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 GZMKP49863 264 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 H3F3AP84243 136 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 SLC25A3Q00325 362 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 SRSF2Q01130 221 aaKnown RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 GUCY1A3Q02108 690 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 CHRNB3Q05901 458 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 SF3A3Q12874 501 aaKnown RBP eCLIP9.35□□□□□ -0.91
SHF-203ENST00000558294 DPY19L1Q2PZI1 675 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 TYW3Q6IPR3 259 aaKnown RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 ZNF621Q6ZSS3 439 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 ALPK2Q86TB3 2170 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 ADGRG3Q86Y34 549 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 MIER2Q8N344 545 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 C1orf162Q8NEQ5 155 aaPredicted RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 SLC35G5Q96KT7 338 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 OR11A1Q9GZK7 315 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 FKRPQ9H9S5 495 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 NPHS2Q9NP85 383 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 MED4Q9NPJ6 270 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 SLC17A5Q9NRA2 495 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 EXD2Q9NVH0 621 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 SLC35A3Q9Y2D2 325 aa9.35□□□□□ -0.91
SHF-203ENST00000558294 NUP214P35658 2090 aaPredicted RBP9.35□□□□□ -0.91
SHF-203ENST00000558294 PLCE1Q9P212 2302 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 RNF103-CHMP3A0A140T963 221 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 SLC35F4A4IF30 521 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
SHF-203ENST00000558294 IL6P05231 212 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 GSNP06396 782 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 GUSBP08236 651 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 VIMP08670 466 aaKnown RBP9.34□□□□□ -0.91
SHF-203ENST00000558294 SRD5A1P18405 259 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 NCF2P19878 526 aaPredicted RBP9.34□□□□□ -0.91
SHF-203ENST00000558294 UQCRC2P22695 453 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 FKBP2P26885 142 aaKnown RBP9.34□□□□□ -0.91
SHF-203ENST00000558294 CHI3L1P36222 383 aaPredicted RBP9.34□□□□□ -0.91
SHF-203ENST00000558294 MAGEA8P43361 318 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 POLR2JP52435 117 aaKnown RBP9.34□□□□□ -0.91
SHF-203ENST00000558294 OR2B6P58173 313 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 STX1BP61266 288 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 PLAURQ03405 335 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 FUT5Q11128 374 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 MST1LQ2TV78 715 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 FAM120AOSQ5T036 256 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 TSPO2Q5TGU0 170 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 C9orf135Q5VTT2 229 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 FAM166AQ6J272 317 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 CASP12Q6UXS9 341 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 IL17RELQ6ZVW7 336 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 C16orf62Q7Z3J2 963 aa9.34□□□□□ -0.91
SHF-203ENST00000558294 GRINAQ7Z429 371 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms