RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CST8O60676 142 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 OLFM2O95897 454 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 NUDT17P0C025 328 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 SBK2P0C263 348 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 RHOXF2BP0C7M4 288 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 UROSP10746 265 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 CYP2F1P24903 491 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 CCR1P32246 355 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 OR1D2P34982 312 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 SERPINB6P35237 376 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 MAGEB1P43366 347 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 IFNAR2P48551 515 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 MFAP2P55001 183 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 CDH6P55285 790 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 YWHAGP61981 247 aaKnown RBP eCLIP2.64□□□□□ -1.99
VRK1-207ENST00000557352 DEFB103AP81534 67 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 OVGP1Q12889 678 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 BTG3Q14201 252 aaPredicted RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 SLC10A1Q14973 349 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PAFAH1B3Q15102 231 aaKnown RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 PDK1Q15118 436 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PSMD5Q16401 504 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 SLC39A12Q504Y0 691 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 DEFB128Q7Z7B8 93 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 ITIH5Q86UX2 942 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TMEM126BQ8IUX1 230 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 CCDC50Q8IVM0 306 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 ENTHD1Q8IYW4 607 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 IQCKQ8N0W5 287 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 DEFB106AQ8N104 65 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 ALLCQ8N6M5 410 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PQLC3Q8N755 202 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 LEMD2Q8NC56 503 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 OR13F1Q8NGS4 319 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 ACTL9Q8TC94 416 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 DQX1Q8TE96 717 aaKnown RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 RNF139Q8WU17 664 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 RAPGEF5Q92565 580 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 P3H4Q92791 437 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 GGHQ92820 318 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 ART4Q93070 314 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PSMG2Q969U7 264 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 LRRC39Q96DD0 335 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 RAB3CQ96E17 227 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 SNF8Q96H20 258 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 BTN2A3PQ96KV6 586 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TTC25Q96NG3 672 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TECTBQ96PL2 329 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TSGA13Q96PP4 275 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 QKIQ96PU8 341 aaKnown RBP eCLIP2.64□□□□□ -1.99
VRK1-207ENST00000557352 CSPG4P5Q96PW8 444 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PANX3Q96QZ0 392 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 KCNK16Q96T55 309 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 FMO2Q99518 471 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 VAT1Q99536 393 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 RHOXF2Q9BQY4 288 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 MED10Q9BTT4 135 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TMEM109Q9BVC6 243 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 SLC5A7Q9GZV3 580 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TIGARQ9NQ88 270 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PIGVQ9NUD9 493 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 CNIH4Q9P003 139 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 UXTQ9UBK9 157 aaPredicted RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 SEC14L4Q9UDX3 406 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PRODH2Q9UF12 536 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 MTRF1LQ9UGC7 380 aaKnown RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 FETUBQ9UGM5 382 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 KLHL21Q9UJP4 597 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 STOML2Q9UJZ1 356 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 NEU3Q9UQ49 428 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 PRG3Q9Y2Y8 225 aaPredicted RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 LAMA3Q16787 3333 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 BPTFQ12830 3046 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 PI4KAP42356 2102 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 C5orf42Q9H799 3197 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 FAM231BA6NCW3 169 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 A8MX80 341 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 I3L4J1 428 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 AP3B1O00203 1094 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 DNALI1O14645 258 aaPredicted RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 CHADO15335 359 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 CACNG3O60359 315 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ZNF861PO60384 105 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SPAG6O75602 509 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ANXA9O76027 345 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 OAS1P00973 400 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 IGLV1-47P01700 117 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 APOEP02649 317 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ABHD2P08910 425 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SNRPCP09234 159 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 MLNP12872 115 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 NR2C1P13056 603 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 HMGA1P17096 107 aaKnown RBP2.63□□□□□ -1.99
VRK1-207ENST00000557352 VCLP18206 1134 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 ATF6P18850 670 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 TPSB2P20231 275 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 FDFT1P37268 417 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 MAGEA3P43357 314 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SULT1E1P49888 294 aa2.63□□□□□ -1.99
VRK1-207ENST00000557352 SERPINH1P50454 418 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms