RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 P2RX1P51575 399 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TGFBR3Q03167 851 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 HSPB3Q12988 150 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 QPRTQ15274 297 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 DUSP5Q16690 384 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 VPS26BQ4G0F5 336 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TIGD2Q4W5G0 525 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 HIKESHIQ53FT3 197 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SPIN4Q56A73 249 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TECRLQ5HYJ1 363 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ZBTB37Q5TC79 503 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 MROH9Q5TGP6 573 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KLC3Q6P597 504 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 LRIG3Q6UXM1 1119 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 CASP12Q6UXS9 341 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TMPPEQ6ZT21 453 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 C3orf62Q6ZUJ4 267 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 LHFPL2Q6ZUX7 228 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SPATA21Q7Z572 469 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 C1QL2Q7Z5L3 287 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 MTDHQ86UE4 582 aaKnown RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ZBTB46Q86UZ6 589 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 CCDC103Q8IW40 242 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KLHL7Q8IXQ5 586 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 C17orf78Q8N4C9 275 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TMCO5AQ8N6Q1 288 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF614Q8N883 585 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 COX18Q8N8Q8 333 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SLC16A11Q8NCK7 471 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 C1orf162Q8NEQ5 155 aaPredicted RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ACTRT1Q8TDG2 376 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TAF15Q92804 592 aaKnown RBP eCLIP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ARL8AQ96BM9 186 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SLC38A2Q96QD8 506 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 OSBPL9Q96SU4 736 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 DOK1Q99704 481 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ACPTQ9BZG2 426 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SHCBP1LQ9BZQ2 653 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TPK1Q9H3S4 243 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SEC61A2Q9H9S3 476 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 MIEF1Q9NQG6 463 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 UPB1Q9UBR1 384 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF180Q9UJW8 692 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 GRID1Q9ULK0 1009 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ICAM5Q9UMF0 924 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 NFU1Q9UMS0 254 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 WBP11Q9Y2W2 641 aaKnown RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 JRKLQ9Y4A0 524 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 CORINQ9Y5Q5 1042 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 DYNC2H1Q8NCM8 4307 aaKnown RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 A0A096LPK6 155 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TMEM129A0AVI4 362 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 H3BNH8 94 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 STX16-NPEPL1H3BU86 382 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 STX16O14662 325 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 SMIM24O75264 130 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 ULK1O75385 1050 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 RPS17P08708 135 aaKnown RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 ALOX5P09917 674 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TFPIP10646 304 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TCN1P20061 433 aaPredicted RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 NPR2P20594 1047 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 PRTN3P24158 256 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 COL8A2P25067 703 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 MPGP29372 298 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 HMOX2P30519 316 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 CALCRP30988 508 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 LCN1P31025 176 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 THBS4P35443 961 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 SUMO3P55854 103 aaPredicted RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 LMO4P61968 165 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TUBA1BP68363 451 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TUBA4AP68366 448 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 CSNK2A1P68400 391 aaPredicted RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 POU6F2P78424 691 aaPredicted RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 MRPS25P82663 173 aaKnown RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 DR1Q01658 176 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 NAAAQ02083 359 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 HGFACQ04756 655 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF763Q0D2J5 394 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 ZP4Q12836 540 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 MERTKQ12866 999 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 PDK3Q15120 406 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 SPATS1Q496A3 300 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 SYT14P1Q58G82 188 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 SLC25A53Q5H9E4 307 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TSPO2Q5TGU0 170 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 FAM71E1Q6IPT2 247 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 C3orf33Q6P1S2 294 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 ANKRD16Q6P6B7 361 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 GALNT18Q6P9A2 607 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TUBA1AQ71U36 451 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 CCDC91Q7Z6B0 441 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 MTERF4Q7Z6M4 381 aaKnown RBP4.62□□□□□ -1.67
HOXB3-213ENST00000552000 CDK20Q8IZL9 346 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 TEX29Q8N6K0 151 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 SIGLECL1Q8N7X8 197 aa4.62□□□□□ -1.67
HOXB3-213ENST00000552000 CDRT4Q8N9R6 151 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms