RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ATP23Q9Y6H3 246 aa14.43□□□□□ -0.1
SSH1-208ENST00000548522 CLDN24A6NM45 220 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 ATP6V1G2-DDX39BF2Z307 99 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 PDLIM1O00151 329 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 NPHS1O60500 1241 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 LMX1BO60663 402 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 SKAP2O75563 359 aaPredicted RBP14.42□□□□□ -0.1
SSH1-208ENST00000548522 FGF4P08620 206 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 CCNA2P20248 432 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 USF1P22415 310 aaPredicted RBP14.42□□□□□ -0.1
SSH1-208ENST00000548522 CALB2P22676 271 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 MAPK1P28482 360 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 RYKP34925 604 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 PGM1P36871 562 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 RPL3P39023 403 aaKnown RBP14.42□□□□□ -0.1
SSH1-208ENST00000548522 EFNA4P52798 201 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 FUT5Q11128 374 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 GGTLC2Q14390 218 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 PDK3Q15120 406 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 C6orf136Q5SQH8 315 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 METTL21CQ5VZV1 264 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 ZNF544Q6NX49 715 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 CASP12Q6UXS9 341 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 SSX8Q7RTT4 187 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 FNDC5Q8NAU1 212 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 SLC25A43Q8WUT9 341 aaPredicted RBP14.42□□□□□ -0.1
SSH1-208ENST00000548522 MUS81Q96NY9 551 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 SORT1Q99523 831 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 ATAD3AQ9NVI7 634 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 LPAR3Q9UBY5 353 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 CHRNA9Q9UGM1 479 aa14.42□□□□□ -0.1
SSH1-208ENST00000548522 MALRD1Q5VYJ5 2156 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 RNF103-CHMP3A0A140T963 221 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 KIAA0513O60268 411 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 MGRN1O60291 552 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 STX11O75558 287 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 C1QCP02747 245 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 DDX5P17844 614 aaKnown RBP14.41□□□□□ -0.1
SSH1-208ENST00000548522 SRD5A1P18405 259 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 PGCP20142 388 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 MATN1P21941 496 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 SLC16A1P53985 500 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 LSM12Q3MHD2 195 aaKnown RBP14.41□□□□□ -0.1
SSH1-208ENST00000548522 ATP6AP1LQ52LC2 224 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 EIF3MQ7L2H7 374 aaKnown RBP14.41□□□□□ -0.1
SSH1-208ENST00000548522 C6orf120Q7Z4R8 191 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 TMEM234Q8WY98 164 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 PROX1Q92786 737 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 C3orf49Q96BT1 292 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 MOAP1Q96BY2 351 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 SLC35G5Q96KT7 338 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 SORCS2Q96PQ0 1159 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 DUSP26Q9BV47 211 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 PRR14Q9BWN1 585 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 AMBRA1Q9C0C7 1298 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 BHLHE41Q9C0J9 482 aaPredicted RBP14.41□□□□□ -0.1
SSH1-208ENST00000548522 RAP2CQ9Y3L5 183 aa14.41□□□□□ -0.1
SSH1-208ENST00000548522 YLPM1P49750 1951 aaKnown RBP14.41□□□□□ -0.1
SSH1-208ENST00000548522 IGHV4-61A0A0C4DH41 118 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 VWC2LB2RUY7 222 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 HAX1O00165 279 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 SLC22A2O15244 555 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 MRPL33O75394 65 aaKnown RBP14.4□□□□□ -0.1
SSH1-208ENST00000548522 LYPLA1O75608 230 aaPredicted RBP14.4□□□□□ -0.1
SSH1-208ENST00000548522 PMS2P2O95744 297 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 T-ENOLP0DO92 83 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 G6PDP11413 515 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 AQP5P55064 265 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 LSM11P83369 360 aaKnown RBP eCLIP14.4□□□□□ -0.1
SSH1-208ENST00000548522 MST1LQ2TV78 715 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 PGS1Q32NB8 556 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 ARHGAP11BQ3KRB8 267 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 FAM120AOSQ5T036 256 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 OR4F3Q6IEY1 312 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 TYW3Q6IPR3 259 aaKnown RBP14.4□□□□□ -0.1
SSH1-208ENST00000548522 ZNF563Q8TA94 476 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 PIGXQ8TBF5 258 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 RAB8BQ92930 207 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 ZG16BQ96DA0 208 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 MSI2Q96DH6 328 aaKnown RBP14.4□□□□□ -0.1
SSH1-208ENST00000548522 FBXO17Q96EF6 278 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 NSL1Q96IY1 281 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 C20orf27Q9GZN8 174 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 OR51I1Q9H343 314 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 MMADHCQ9H3L0 296 aaPredicted RBP14.4□□□□□ -0.1
SSH1-208ENST00000548522 EML4Q9HC35 981 aaKnown RBP14.4□□□□□ -0.1
SSH1-208ENST00000548522 SLC17A5Q9NRA2 495 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 SLC7A10Q9NS82 523 aa14.4□□□□□ -0.1
SSH1-208ENST00000548522 NUP214P35658 2090 aaPredicted RBP14.39□□□□□ -0.11
SSH1-208ENST00000548522 AP3D1O14617 1153 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 OR12D1P0DN82 309 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 PRPS1L1P21108 318 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 APOBEC1P41238 236 aaKnown RBP14.39□□□□□ -0.11
SSH1-208ENST00000548522 OR2B6P58173 313 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 TSPO2Q5TGU0 170 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 TNFAIP8L2Q6P589 184 aaPredicted RBP14.39□□□□□ -0.11
SSH1-208ENST00000548522 FRRS1Q6ZNA5 592 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 C16orf62Q7Z3J2 963 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 GRINAQ7Z429 371 aa14.39□□□□□ -0.11
SSH1-208ENST00000548522 ADGRG3Q86Y34 549 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms