RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 LIMK1P53667 647 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 DLX5P56178 289 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 RPS15P62841 145 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 UBE2UQ5VVX9 321 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 TMEM81Q6P7N7 255 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 OAFQ86UD1 273 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 CADM3Q8N126 398 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 STX19Q8N4C7 294 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 DEFB124Q8NES8 71 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 GPR119Q8TDV5 335 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 RORBQ92753 470 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ZNF524Q96C55 264 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 KLHDC3Q9BQ90 382 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 CDCA4Q9BXL8 241 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 GPR87Q9BY21 358 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 FN3KQ9H479 309 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ZNF160Q9HCG1 818 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 AMBNQ9NP70 447 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ZNF337Q9Y3M9 751 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 TRAV27A0A087WT01 109 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 IRGMA1A4Y4 181 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 C17orf51A8MQB3 221 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 CELA2AP08217 269 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 INHBBP09529 407 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 FTH1P19P0C7X4 201 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ITPKBP27987 946 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 SLC6A6P31641 620 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 HTR3AP46098 478 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 POLR2HP52434 150 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 GP2P55259 537 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 RPS18P62269 152 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 ST3GAL4Q11206 333 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 DNASE1L3Q13609 305 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 QPRTQ15274 297 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 COL28A1Q2UY09 1125 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ZNF791Q3KP31 576 aaPredicted RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 SYT6Q5T7P8 510 aaPredicted RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 RNLSQ5VYX0 342 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 THSD4Q6ZMP0 1018 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 RTL4Q6ZR62 310 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 NLGN4YQ8NFZ3 816 aaPredicted RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 OR5M3Q8NGP4 307 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 DUSP19Q8WTR2 217 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ST8SIA1Q92185 356 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 FAM86C1Q9NVL1 165 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 MRPS18AQ9NVS2 196 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 TAS2R10Q9NYW0 307 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 YARS2Q9Y2Z4 477 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 ITGA10O75578 1167 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 INMTO95050 263 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 NDUFB2O95178 105 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 STSP08842 583 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 ICAM2P13598 275 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 ACVR2AP27037 513 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 MSX1P28360 303 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 OTX2P32243 289 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 PTGDSP41222 190 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 CLK1P49759 484 aaKnown RBP8.48□□□□□ -1.05
GNE-206ENST00000543356 EGR4Q05215 589 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 CHAF1BQ13112 559 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 SELENBP1Q13228 472 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 SPCS2Q15005 226 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 TOMM34Q15785 309 aaPredicted RBP8.48□□□□□ -1.05
GNE-206ENST00000543356 ZNF74Q16587 644 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 ZNF829Q3KNS6 432 aaPredicted RBP8.48□□□□□ -1.05
GNE-206ENST00000543356 CEP78Q5JTW2 689 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 AADACL4Q5VUY2 407 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 OPN5Q6U736 354 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 GRINAQ7Z429 371 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 OR10G3Q8NGC4 313 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 RFKQ969G6 155 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 ISOC1Q96CN7 298 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 TNFRSF13CQ96RJ3 184 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 SECISBP2Q96T21 854 aaKnown RBP8.48□□□□□ -1.05
GNE-206ENST00000543356 DOK1Q99704 481 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 DCUN1D5Q9BTE7 237 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 IFT27Q9BW83 186 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 MARCH7Q9H992 704 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 SDHAF3Q9NRP4 125 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 KLRF1Q9NZS2 232 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 IL20RAQ9UHF4 553 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 OSGIN1Q9UJX0 560 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.48□□□□□ -1.05
GNE-206ENST00000543356 HEATR5AQ86XA9 2040 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 TP53I11O14683 189 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 RAD1O60671 282 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 TNFSF15O95150 251 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 NUDT14O95848 222 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 CH25HO95992 272 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 CXCR1P25024 350 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 C21orf33P30042 268 aaPredicted RBP8.48□□□□□ -1.05
GNE-206ENST00000543356 SOX3P41225 446 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 MLLT10P55197 1068 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 SNTA1Q13424 505 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 STK11Q15831 433 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 NXNL2Q5VZ03 156 aa8.48□□□□□ -1.05
GNE-206ENST00000543356 ARHGAP11AQ6P4F7 1023 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms