RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MAD2L1BPQ15013 274 aaPredicted RBP19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 ZNF74Q16587 644 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 CCDC103Q8IW40 242 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 RHOXF1Q8NHV9 184 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 UBL7Q96S82 380 aaPredicted RBP19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 APOL4Q9BPW4 351 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 PTDSS2Q9BVG9 487 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 TSSK6Q9BXA6 273 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 PCDHGB7Q9Y5F8 929 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 CDH10Q9Y6N8 788 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 MED12Q93074 2177 aa19.85■□□□□ 0.77
PACSIN3-209ENST00000532457 CDK2AP1O14519 115 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 SMNDC1O75940 238 aaKnown RBP eCLIP19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 RFPL3SP0C7P2 107 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 HTR3AP46098 478 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 RPS5P46782 204 aaKnown RBP19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 MASP1P48740 699 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 FOXO1Q12778 655 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 SMN1Q16637 294 aaKnown RBP19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 GXYLT1Q4G148 440 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 C6orf141Q5SZD1 244 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 OAFQ86UD1 273 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 OR52D1Q9H346 318 aa19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 TUBA8Q9NY65 449 aaPredicted RBP19.84■□□□□ 0.77
PACSIN3-209ENST00000532457 LRRC3CA6NJW4 275 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 APOBEC1P41238 236 aaKnown RBP19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 RPS6KA3P51812 740 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 EFNB1P98172 346 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 ZBED5Q49AG3 693 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 CLDN22Q8N7P3 220 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 SETD9Q8NE22 299 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 TM9SF4Q92544 642 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 SMAD5Q99717 465 aaKnown RBP19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 ADNPQ9H2P0 1102 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 SLC25A19Q9HC21 320 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 TIMMDC1Q9NPL8 285 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 TUBD1Q9UJT1 453 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 HSPE1-MOB4S4R3N1 261 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 EPG5Q9HCE0 2579 aa19.83■□□□□ 0.77
PACSIN3-209ENST00000532457 NCKAP5O14513 1909 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 MAGEA13PA6NCF6 341 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 SLC25A12O75746 678 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 IGF2P01344 180 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 BGLAPP02818 100 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 FMO3P31513 532 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 MFAP5Q13361 173 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 MDS2Q8NDY4 140 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 ATP6V1C2Q8NEY4 427 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 LIPHQ8WWY8 451 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 OSTF1Q92882 214 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 MRGPRX4Q96LA9 322 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 UBQLN3Q9H347 655 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 PTGES2Q9H7Z7 377 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 TVP23BQ9NYZ1 205 aa19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 RPH3AQ9Y2J0 694 aaPredicted RBP19.83■□□□□ 0.76
PACSIN3-209ENST00000532457 A8MVM7 634 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 CBR3O75828 277 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 OPN1LWP04000 364 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 DPP4P27487 766 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 CASRP41180 1078 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 NUP107P57740 925 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 SMARCD3Q6STE5 483 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 TEX47Q8TBZ9 253 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 FANK1Q8TC84 345 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 SGCDQ92629 289 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 ABHD17AQ96GS6 310 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 ARL5BQ96KC2 179 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 HHATLQ9HCP6 504 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 KLHL1Q9NR64 748 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 TBC1D23Q9NUY8 699 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 CHRNA9Q9UGM1 479 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 PCDHGB6Q9Y5F9 930 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 FREM3P0C091 2139 aa19.82■□□□□ 0.76
PACSIN3-209ENST00000532457 BOD1L1Q8NFC6 3051 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 TRAV36DV7A0A075B6V5 113 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 ERVH48-1M5A8F1 160 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 ASAH2BP0C7U1 165 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 DSCR4P56555 118 aaPredicted RBP19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 TMEM44Q2T9K0 475 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 LINC00303Q3SY05 128 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 C1orf140Q5VVS0 124 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 SLC27A4Q6P1M0 643 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 SULF2Q8IWU5 870 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 C10orf53Q8N6V4 93 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 HAS2Q92819 552 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 IL4I1Q96RQ9 567 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 ZNF696Q9H7X3 374 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 MYRFQ9Y2G1 1151 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 CSAG2Q9Y5P2 127 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 OR5H15A6NDH6 313 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 PRKYO43930 277 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 HCN1O60741 890 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 HK1P19367 917 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 SMSP52788 366 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 MLLT10P55197 1068 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 CDH15P55291 814 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 CDC42P60953 191 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 BCDIN3DQ7Z5W3 292 aaKnown RBP19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 OR2M7Q8NG81 312 aa19.81■□□□□ 0.76
PACSIN3-209ENST00000532457 MOSPD2Q8NHP6 518 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms