RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 IGHA1P01876 353 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 HLA-DPB1P04440 258 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 HNRNPCP07910 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
USF1-208ENST00000528768 HBQ1P09105 142 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 PNMTP11086 282 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 GLB1P16278 677 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CD53P19397 219 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 FBLP22087 321 aaKnown RBP10.77□□□□□ -0.69
USF1-208ENST00000528768 NOS3P29474 1203 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 ADH7P40394 386 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 ETV6P41212 452 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CRYBB2P43320 205 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 PPICP45877 212 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 GFERP55789 205 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 TAS2R43P59537 309 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 ACTC1P68032 377 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 ACTA1P68133 377 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 BTG2P78543 158 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 OXA1LQ15070 435 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 DGAT2L6Q6ZPD8 337 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 QSOX2Q6ZRP7 698 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 TMEM151BQ8IW70 566 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CADM2Q8N3J6 435 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 ACBD7Q8N6N7 88 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 BCORP1Q8N888 145 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 RCBTB1Q8NDN9 531 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 PFN4Q8NHR9 129 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 C16orf52Q8NHV5 167 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 DAZLQ92904 295 aaKnown RBP10.77□□□□□ -0.69
USF1-208ENST00000528768 SECISBP2Q96T21 854 aaKnown RBP10.77□□□□□ -0.69
USF1-208ENST00000528768 SLC30A2Q9BRI3 323 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CCDC32Q9BV29 185 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 LRRN3Q9H3W5 708 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 SP140LQ9H930 580 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 SMURF1Q9HCE7 757 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 UBQLN4Q9NRR5 601 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 ASB6Q9NWX5 421 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 SIGLEC7Q9Y286 467 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CLCA3PQ9Y6N3 262 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 RP1L1Q8IWN7 2480 aaPredicted RBP10.77□□□□□ -0.69
USF1-208ENST00000528768 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 IGHV1OR21-1A0A087WYE8 117 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 IQCMA0A1B0GVH7 501 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 TRDV1A0A1B0GX56 115 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 DAPL1A0PJW8 107 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ZNF891A8MT65 544 aaPredicted RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 NPIPB9F8W1W9 429 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 GTPBP1O00178 669 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 BHLHE40O14503 412 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 CDC42EP2O14613 210 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PTP4A3O75365 173 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 NDUFB2O95178 105 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 IGF2P01344 180 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ADRA2AP08913 450 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 GAAP10253 952 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PEPDP12955 493 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PNLIPP16233 465 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 MAKP20794 623 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 MAOAP21397 527 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ALAS2P22557 587 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 FGF9P31371 208 aaPredicted RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 TGFBR1P36897 503 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ACAA2P42765 397 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 RANBP1P43487 201 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 SLC6A8P48029 635 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 RNF144AP50876 292 aaPredicted RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 BCAP31P51572 246 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 GAS1P54826 345 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 RPS7P62081 194 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 ZFP36L1Q07352 338 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 KLRB1Q12918 225 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ERV3-1Q14264 604 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ELAVL1Q15717 326 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 CRTC2Q53ET0 693 aaPredicted RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 WBP2NLQ6ICG8 309 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 NIPAL3Q6P499 406 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PLBD1Q6P4A8 553 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PLEKHG7Q6ZR37 379 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 TTLL10Q6ZVT0 673 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PRSS42Q7Z5A4 293 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 GPALPP1Q8IXQ4 340 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ZNF615Q8N8J6 731 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 GATAD2BQ8WXI9 593 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 CCDC74AQ96AQ1 378 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 NACC2Q96BF6 587 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 KCNN2Q9H2S1 579 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ZNF304Q9HCX3 659 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 HINT3Q9NQE9 182 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 EXOSC3Q9NQT5 275 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 PNO1Q9NRX1 252 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 SNTG1Q9NSN8 517 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 TXNL4BQ9NX01 149 aaKnown RBP10.76□□□□□ -0.69
USF1-208ENST00000528768 ERVK13-1Q9NX77 482 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ADAM30Q9UKF2 790 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 ICAM5Q9UMF0 924 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 CARD8Q9Y2G2 431 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 PCDHGB7Q9Y5F8 929 aa10.76□□□□□ -0.69
USF1-208ENST00000528768 FBN2P35556 2912 aa10.75□□□□□ -0.69
USF1-208ENST00000528768 FRG2CA6NGY1 282 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms