RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ZDHHC2Q9UIJ5 367 aa8.69□□□□□ -1.02
CAPN1-210ENST00000527699 TMED5Q9Y3A6 229 aa8.69□□□□□ -1.02
CAPN1-210ENST00000527699 SLC25A15Q9Y619 301 aa8.69□□□□□ -1.02
CAPN1-210ENST00000527699 RNF103-CHMP3A0A140T963 221 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ZNF716A6NP11 495 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ZNF724A8MTY0 619 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ATP6V1G2-DDX39BF2Z307 99 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 AP3D1O14617 1153 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 KLF11O14901 512 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 TCF21O43680 179 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 MRPL33O75394 65 aaKnown RBP8.68□□□□□ -1.02
CAPN1-210ENST00000527699 LYPLA1O75608 230 aaPredicted RBP8.68□□□□□ -1.02
CAPN1-210ENST00000527699 PGM3O95394 542 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 HSPA4LO95757 839 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ITGA5P08648 1049 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 DHRS4L1P0CG22 281 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 PGCP20142 388 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 COX5AP20674 150 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 MAPK1P28482 360 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ARRB2P32121 409 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 MLC1Q15049 377 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 GABRA6Q16445 453 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 C6orf136Q5SQH8 315 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ABLIM2Q6H8Q1 611 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 VHLLQ6RSH7 139 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 KLHL17Q6TDP4 642 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
CAPN1-210ENST00000527699 DEPDC4Q8N2C3 294 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 FITM2Q8N6M3 262 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 WDR31Q8NA23 367 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 C10orf105Q8TEF2 133 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 TUBGCP3Q96CW5 907 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ZG16BQ96DA0 208 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 METTL2AQ96IZ6 378 aaKnown RBP8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ZNF570Q96NI8 536 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 DCLRE1BQ9H816 532 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 GP6Q9HCN6 339 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ACER3Q9NUN7 267 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ATAD3AQ9NVI7 634 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 ASB6Q9NWX5 421 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 UPB1Q9UBR1 384 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 MOKQ9UQ07 419 aa8.68□□□□□ -1.02
CAPN1-210ENST00000527699 TMEM72A0PK05 275 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 WDR91A4D1P6 747 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 LMX1BO60663 402 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 STX11O75558 287 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 ITGA2P17301 1181 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 USF1P22415 310 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 IGFBP5P24593 272 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 IDH2P48735 452 aaKnown RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 NME5P56597 212 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 NAA20P61599 178 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 TUBA1BP68363 451 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 TUBA4AP68366 448 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 CSNK2A1P68400 391 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 LSM11P83369 360 aaKnown RBP eCLIP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 LGALS3BPQ08380 585 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 ZNF141Q15928 474 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 C11orf91Q3C1V1 193 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 ARHGAP11BQ3KRB8 267 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 GPAT3Q53EU6 434 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 HIKESHIQ53FT3 197 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 HHATQ5VTY9 493 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 DNAJC14Q6Y2X3 702 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 TUBA1AQ71U36 451 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 ADGRG3Q86Y34 549 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 SFXN5Q8TD22 340 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 COQ8BQ96D53 544 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 ZHX1-C8orf76Q96EF9 292 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 PRPF18Q99633 342 aaKnown RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 VRK1Q99986 396 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 CCDC28BQ9BUN5 200 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 CCDC106Q9BWC9 280 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 EML4Q9HC35 981 aaKnown RBP8.67□□□□□ -1.02
CAPN1-210ENST00000527699 SLC7A10Q9NS82 523 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 EMC3Q9P0I2 261 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 CHRNA9Q9UGM1 479 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 LRRC42Q9Y546 428 aa8.67□□□□□ -1.02
CAPN1-210ENST00000527699 TMED7-TICAM2A0A0A6YYA0 188 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 LOC100289279A0A1B0GTE1 492 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 ZC3H12DA2A288 527 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TM9SF1O15321 606 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 ITM2AO43736 263 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 NPHS1O60500 1241 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 CCDC22O60826 627 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 EDF1O60869 148 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 FGF4P08620 206 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 IMPDH2P12268 514 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 SLC25A16P16260 332 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 PTAFRP25105 342 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 PGM1P36871 562 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 RPL3P39023 403 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 VHLP40337 213 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 MAGEA8P43361 318 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 DSCR9P59020 149 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 VLDLRP98155 873 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 LOXL1Q08397 574 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 FUT5Q11128 374 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 IQCCQ4KMZ1 466 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms