RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 ZNF385AQ96PM9 386 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 RSPO3Q9BXY4 272 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 ACPTQ9BZG2 426 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 CTPS2Q9NRF8 586 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 ASH2LQ9UBL3 628 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 SEC14L4Q9UDX3 406 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 NFU1Q9UMS0 254 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 NOX1Q9Y5S8 564 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 CACNG2Q9Y698 323 aa9.4□□□□□ -0.9
CTNNA1-234ENST00000522227 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 ARPC4-TTLL3A0A0A6YYG9 625 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF587BE7ETH6 402 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF264O43296 627 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 TPD52L2O43399 206 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 PMS2P2O95744 297 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 UBL4AP11441 157 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 EFNA1P20827 205 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 IVDP26440 423 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 CAPZA2P47755 286 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 HTR6P50406 440 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 C2orf68Q2NKX9 166 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 GGTA1PQ4G0N0 100 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 LINGO2Q7L985 606 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 ABHD12BQ7Z5M8 362 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 POMGNT2Q8NAT1 580 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 KIF18AQ8NI77 898 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 ST7LQ8TDW4 575 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 CIDECQ96AQ7 238 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 MRRFQ96E11 262 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 GIMAP5Q96F15 307 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 SLC30A2Q9BRI3 323 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 TRIM31Q9BZY9 425 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 LEF1Q9UJU2 399 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 PURGQ9UJV8 347 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 GRID1Q9ULK0 1009 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 TENM3Q9P273 2699 aa9.39□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF503-AS2A6NEH8 195 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 TRIM49D1C9J1S8 452 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 CLDN25C9JDP6 229 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 OTCP00480 354 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 IGKV3-15P01624 115 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 C2P06681 752 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 BCKDHAP12694 445 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 CBR1P16152 277 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 NR4A1P22736 598 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 LCN1P31025 176 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 POU3F1Q03052 451 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 ILF2Q12905 390 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF154Q13106 437 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 HNRNPA0Q13151 305 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 SLC17A1Q14916 467 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 C3orf36Q3SXR2 165 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 SPIN4Q56A73 249 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 SPDYAQ5MJ70 313 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 GRTP1Q5TC63 336 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 GKAP1Q5VSY0 366 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 FAM71E1Q6IPT2 247 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 MDP1Q86V88 176 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 OR52E2Q8NGJ4 325 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 SLC25A43Q8WUT9 341 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 HOXB13Q92826 284 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 MS4A3Q96HJ5 214 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 MS4A4EQ96PG1 132 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 MRI1Q9BV20 369 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 BTBD2Q9BX70 525 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 VPS11Q9H270 941 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF225Q9UK10 706 aa9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 POLR3HQ9Y535 204 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-234ENST00000522227 IGHV1-69-2A0A0G2JMI3 117 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 TRAPPC2LH3BP13 241 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 PDPK1O15530 556 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 FRS3O43559 492 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 EIF4E2O60573 245 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 NDUFA7O95182 113 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 MPIG6BO95866 241 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 KRT6AP02538 564 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 KRT6BP04259 564 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 UBTFL6P0CB48 400 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 HMOX2P30519 316 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 RYKP34925 604 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 KRT6CP48668 564 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 EVX1P49640 407 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 SELENOPP49908 381 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ATP12AP54707 1039 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ARF1P84077 181 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF763Q0D2J5 394 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 DEFB112Q30KQ8 113 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 TECRLQ5HYJ1 363 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 PDZK1Q5T2W1 519 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 KLC3Q6P597 504 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 PAQR6Q6TCH4 344 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 USP51Q70EK9 711 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms